fobi_terms
FOBI's `ontology_index` object - Jul 23, 2021
Bundled with fobitools · exported, loads via data()
Class
ontology_index
Elements
6
Missing
0
Format
rda · bzip2
version 2 · 21 KB
File
data/fobi_terms.rda
Fingerprint
1d378a99
Format documented
Yes
Source
https://github.com/pcastellanoescuder/FoodBiomarkerOntology
About this object
An ontology held as parallel vectors indexed by term id: the name of each term, and its parents, children and ancestors as list columns of ids. The hierarchy is the ancestor lists rather than an edge table, so every term carries its whole lineage. R object catalogue
Structure
Distinct
6
Nesting depth
2
Element length
879 – 1,338
Total length
7,569
Elements
Element
Type
Distinct
Missing
Summary
id
character
1,338
0
8 – 15 characters
name
character
879
0
4 – 63 characters
parentslist3670character
Element class
character
Element length
0 – 1
Total length
1,332
What is inside it
Element
Type
Distinct
Missing
Summary
CHEBI:10219
character
1
0
11 characters
CHEBI:10362
character
1
0
11 characters
CHEBI:11060
character
1
0
11 characters
CHEBI:1427
character
1
0
11 characters
CHEBI:15600
character
1
0
11 characters
CHEBI:15671
character
1
0
11 characters
CHEBI:15724
character
1
0
11 characters
CHEBI:15727
character
1
0
11 characters
CHEBI:15761
character
1
0
11 characters
CHEBI:15864
character
1
0
11 characters
CHEBI:15891
character
1
0
11 characters
CHEBI:15948
character
1
0
11 characters
CHEBI:15964
character
1
0
11 characters
CHEBI:16112
character
1
0
11 characters
CHEBI:16164
character
1
0
11 characters
CHEBI:16196
character
1
0
11 characters
CHEBI:16207
character
1
0
11 characters
CHEBI:16243
character
1
0
11 characters
CHEBI:16285
character
1
0
11 characters
CHEBI:16384
character
1
0
11 characters
CHEBI:16411
character
1
0
11 characters
CHEBI:16603
character
1
0
11 characters
CHEBI:16737
character
1
0
11 characters
CHEBI:16828
character
1
0
11 characters
CHEBI:16914
character
1
0
11 characters
CHEBI:16958
character
1
0
11 characters
CHEBI:17254
character
1
0
11 characters
CHEBI:17276
character
1
0
11 characters
CHEBI:17295
character
1
0
11 characters
CHEBI:17377
character
1
0
11 characters
CHEBI:17385
character
1
0
11 characters
CHEBI:17395
character
1
0
11 characters
CHEBI:17439
character
1
0
11 characters
CHEBI:17445
character
1
0
11 characters
CHEBI:17574
character
1
0
11 characters
CHEBI:17579
character
1
0
11 characters
CHEBI:17597
character
1
0
11 characters
CHEBI:17620
character
1
0
11 characters
CHEBI:17691
character
1
0
11 characters
CHEBI:17846
character
1
0
11 characters
CHEBI:17847
character
1
0
11 characters
CHEBI:17884
character
1
0
11 characters
CHEBI:17895
character
1
0
11 characters
CHEBI:17992
character
1
0
11 characters
CHEBI:18048
character
1
0
11 characters
CHEBI:18088
character
1
0
11 characters
CHEBI:18089
character
1
0
11 characters
CHEBI:18095
character
1
0
11 characters
CHEBI:18101
character
1
0
11 characters
CHEBI:18112
character
1
0
11 characters
childrenlist3670character
Element class
character
Element length
0 – 74
Total length
1,332
What is inside it
Element
Type
Distinct
Missing
Summary
CHEBI:10219
character
0
0
–
CHEBI:10362
character
0
0
–
CHEBI:11060
character
0
0
–
CHEBI:1427
character
0
0
–
CHEBI:15600
character
0
0
–
CHEBI:15671
character
0
0
–
CHEBI:15724
character
0
0
–
CHEBI:15727
character
0
0
–
CHEBI:15761
character
0
0
–
CHEBI:15864
character
0
0
–
CHEBI:15891
character
0
0
–
CHEBI:15948
character
0
0
–
CHEBI:15964
character
0
0
–
CHEBI:16112
character
0
0
–
CHEBI:16164
character
0
0
–
CHEBI:16196
character
0
0
–
CHEBI:16207
character
0
0
–
CHEBI:16243
character
0
0
–
CHEBI:16285
character
0
0
–
CHEBI:16384
character
0
0
–
CHEBI:16411
character
0
0
–
CHEBI:16603
character
0
0
–
CHEBI:16737
character
0
0
–
CHEBI:16828
character
0
0
–
CHEBI:16914
character
0
0
–
CHEBI:16958
character
0
0
–
CHEBI:17254
character
0
0
–
CHEBI:17276
character
0
0
–
CHEBI:17295
character
0
0
–
CHEBI:17377
character
0
0
–
CHEBI:17385
character
0
0
–
CHEBI:17395
character
0
0
–
CHEBI:17439
character
0
0
–
CHEBI:17445
character
0
0
–
CHEBI:17574
character
0
0
–
CHEBI:17579
character
0
0
–
CHEBI:17597
character
0
0
–
CHEBI:17620
character
0
0
–
CHEBI:17691
character
0
0
–
CHEBI:17846
character
0
0
–
CHEBI:17847
character
0
0
–
CHEBI:17884
character
0
0
–
CHEBI:17895
character
0
0
–
CHEBI:17992
character
0
0
–
CHEBI:18048
character
0
0
–
CHEBI:18088
character
0
0
–
CHEBI:18089
character
0
0
–
CHEBI:18095
character
0
0
–
CHEBI:18101
character
0
0
–
CHEBI:18112
character
0
0
–
ancestorslist1,3380character
Element class
character
Element length
1 – 9
Total length
7,172
What is inside it
Element
Type
Distinct
Missing
Summary
CHEBI:10219
character
6
0
10 – 11 characters
CHEBI:10362
character
7
0
10 – 11 characters
CHEBI:11060
character
6
0
10 – 11 characters
CHEBI:1427
character
4
0
10 – 11 characters
CHEBI:15600
character
7
0
10 – 11 characters
CHEBI:15671
character
6
0
10 – 11 characters
CHEBI:15724
character
6
0
10 – 11 characters
CHEBI:15727
character
5
0
10 – 11 characters
CHEBI:15761
character
6
0
10 – 11 characters
CHEBI:15864
character
5
0
10 – 11 characters
CHEBI:15891
character
6
0
10 – 11 characters
CHEBI:15948
character
7
0
10 – 11 characters
CHEBI:15964
character
5
0
10 – 11 characters
CHEBI:16112
character
8
0
10 – 11 characters
CHEBI:16164
character
7
0
10 – 11 characters
CHEBI:16196
character
6
0
10 – 11 characters
CHEBI:16207
character
8
0
10 – 11 characters
CHEBI:16243
character
6
0
10 – 11 characters
CHEBI:16285
character
6
0
10 – 11 characters
CHEBI:16384
character
8
0
10 – 11 characters
CHEBI:16411
character
6
0
10 – 11 characters
CHEBI:16603
character
7
0
10 – 11 characters
CHEBI:16737
character
7
0
10 – 11 characters
CHEBI:16828
character
5
0
10 – 11 characters
CHEBI:16914
character
8
0
10 – 11 characters
CHEBI:16958
character
7
0
10 – 11 characters
CHEBI:17254
character
6
0
10 – 11 characters
CHEBI:17276
character
6
0
10 – 11 characters
CHEBI:17295
character
8
0
10 – 11 characters
CHEBI:17377
character
8
0
10 – 11 characters
CHEBI:17385
character
4
0
10 – 11 characters
CHEBI:17395
character
6
0
10 – 11 characters
CHEBI:17439
character
8
0
10 – 11 characters
CHEBI:17445
character
5
0
10 – 11 characters
CHEBI:17574
character
7
0
10 – 11 characters
CHEBI:17579
character
7
0
10 – 11 characters
CHEBI:17597
character
8
0
10 – 11 characters
CHEBI:17620
character
6
0
10 – 11 characters
CHEBI:17691
character
8
0
10 – 11 characters
CHEBI:17846
character
6
0
10 – 11 characters
CHEBI:17847
character
6
0
10 – 11 characters
CHEBI:17884
character
8
0
10 – 11 characters
CHEBI:17895
character
8
0
10 – 11 characters
CHEBI:17992
character
7
0
10 – 11 characters
CHEBI:18048
character
5
0
10 – 11 characters
CHEBI:18088
character
7
0
10 – 11 characters
CHEBI:18089
character
8
0
10 – 11 characters
CHEBI:18095
character
8
0
10 – 11 characters
CHEBI:18101
character
5
0
10 – 11 characters
CHEBI:18112
character
5
0
10 – 11 characters
obsolete
logical
1
0
0 true·1,338 false
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 6 elements | Unchanged | rda · bzip2 version 2 · 21 KB | exact |
| 3.22 | 2025-10-29 | 6 elements | Unchanged | rda · bzip2 version 2 · 21 KB | exact |
| 3.21 | 2025-04-15 | 6 elements | Unchanged | rda · bzip2 version 2 · 21 KB | exact |
| 3.20 | 2024-10-29 | 6 elements | Unchanged | rda · bzip2 version 2 · 21 KB | exact |
| 3.19 | 2024-04-30 | 6 elements | Unchanged | rda · bzip2 version 2 · 21 KB | exact |
| 3.18 | 2023-10-24 | 6 elements | Unchanged | rda · bzip2 version 2 · 21 KB | exact |
| 3.17 | 2023-04-25 | 6 elements | Unchanged | rda · bzip2 version 2 · 21 KB | exact |
| 3.16 | 2022-11-01 | 6 elements | Unchanged | rda · bzip2 version 2 · 21 KB | exact |
| 3.15 | 2022-04-26 | 6 elements | Unchanged | rda · bzip2 version 2 · 21 KB | exact |
| 3.14 | 2021-10-26 | 6 elements | Unchanged | rda · bzip2 version 2 · 21 KB | exact |
| 3.13 | 2021-10-04 | 6 elements | – | rda · bzip2 version 2 · 21 KB | exact |