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rosaNapaVsDMSODEG

The result of a differential expression analysis done between napabucasin treated and DMSO control MiaPaCa2 cells stably expressing the Rosa26 control vector. The cells were treated for 2 hours with 0.5 uM napabucasin. The protocol to generate the RNA-seq is described in Froeling F.E.M. et al 2019.

Bundled with enrichViewNet · exported, loads via data()

Class
data.frame
Dimensions
23,542 × 4
Missing
11,867
Format
rda · xz
version 3 · 271 KB
File
data/rosaNapaVsDMSODEG.RData
Fingerprint
ddca88c7
Format documented
Yes
Source
The original RNA-sequencing data is available at the Gene Expression Omnibus (GEO) under the accession number GSE135352.
About this object
A table with named columnsA bordered table: a header band ruled off from the body with an empty slot over each column where its name goes, and rows of cells under it that share every edge. Nothing is in any of them.

Equal-length columns presented as a table, R's standard rectangular format. R object catalogue

Columns
Column
Type
Distinct
Missing
Summary
character
23,542
0
15 – 24 characters
numeric
18,600
0
-8.2686 – 7.3793mean 0.0221
Min.
-8.2686
1st Qu.
-0.2504
Median
-0.0057
Mean
0.0221
3rd Qu.
0.1682
Max.
7.3793
Std. dev
0.8973
Skewness
0.482
Kurtosis
7.271
Outliers
4,5282085 low · 2443 high
numeric
1,209
11,867
4.31e-102 – 1mean 0.915
Min.
4.31e-102
1st Qu.
0.9989
Median
0.9989
Mean
0.915
3rd Qu.
0.9989
Max.
1
Std. dev
0.2258
Skewness
-2.947
Kurtosis
7.72
Longest gap
69
Trailing
6
character
23,449
0
2 – 25 characters
Same structure in 1 other dataset

These datasets share the same columns and types but hold different data.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-2823,542 × 4Unchangedrda · xz
version 3 · 271 KB
exact
3.222026-01-0623,542 × 4Unchangedrda · xz
version 3 · 271 KB
exact
3.212025-10-0323,542 × 4Unchangedrda · xz
version 3 · 271 KB
exact
3.202024-10-2923,542 × 4Unchangedrda · xz
version 3 · 271 KB
exact
3.192024-04-3023,542 × 4Unchangedrda · xz
version 3 · 271 KB
exact
3.182023-10-2423,542 × 4–rda · xz
version 3 · 271 KB
exact

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