DT_rice

Rice lines dataset

Bundled with enhancer · exported, loads via data()

Class

data.frame

Dimensions

413 × 39

Missing

1,598

Format

rda · xz

version 2 · 57 KB

File

data/DT_rice.RData

Fingerprint

8c2f58bf

Format documented

Yes

Source

Rice Diversity Organization http://www.ricediversity.org/data/index.cfm.

About this object

Equal-length columns presented as a table, R's standard rectangular format. R object catalogue

Declared attributes

Row names

Yes

Columns

Column

Type

Distinct

Missing

Summary

HybID

factor

413

Levels

413

Used

413

Rows per level, the 50 commonest of 413

@520672006494061024104086320922141@520672006494061024104086320922211@520672006494061024104086320922251@520672006494061024104086320922271@520672006494061024104086320922311@520672006494061024104086320922331@520672006494061024104086320922361@520672006494061024104086320922401@520672006494061024104086320922461@520672006494061024104086320922481@520672006494061024104086320922501@520672006494061024104086320922601@520672006494061024104086320922721@520672006494061024104086320922811@520672006494061024104086320922821@520672006494061024104086320922921@520672006494061024104086320922941@520672006494061024104086320922971@520672006494061024104086320923001@520672006494061024104086320923021@520672006494061024104086320923031@520672006494061024104086320923051@520672006494071024104086320923271@520672006494071024104086320923301@520672006494071024104086320923361@520672006494071024104086320923381@520672006494071024104086320923411@520672006494071024104086320923541@520672006494071024104086320923631@520672006494071024104086320923651@520672006494071024104086320923991@520672006494071024104086320924101081215-A051081215-A061081215-A071081215-A081081215-A101081215-A121081215-B021081215-B031081215-B041081215-B051081215-B061081215-B071081215-B081081215-B091081215-B101081215-B111081215-B121081215-C011

NSFTVID

integer

413

1 – 652mean 234.1

Min.

1st Qu.

112

Median

217

Mean

234.09

3rd Qu.

322

Max.

652

Std. dev

159.322

Skewness

0.9128

Kurtosis

0.6327

Outliers

120 low · 12 high

Flowering.time.at.Arkansas

numeric

269

54.5 – 150.5mean 87.94

Min.

54.5

1st Qu.

79.75

Median

87.7083

Mean

87.9444

3rd Qu.

96.8333

Max.

150.5

Std. dev

12.6272

Skewness

0.227

Kurtosis

1.361

Outliers

30 low · 3 high

Longest gap

Flowering.time.at.Faridpur

integer

108

39 – 110mean 71.77

Min.

1st Qu.

Median

Mean

71.7705

3rd Qu.

Max.

110

Std. dev

8.51

Skewness

-0.2335

Kurtosis

2.126

Outliers

63 low · 3 high

Longest gap

Trailing

Flowering.time.at.Aberdeen

integer

107

45 – 306mean 107.1

Min.

1st Qu.

81.5

Median

Mean

107.05

3rd Qu.

114

Max.

306

Std. dev

38.9568

Skewness

1.712

Kurtosis

3.67

Outliers

370 low · 37 high

Longest gap

FT.ratio.of.Arkansas.Aberdeen

numeric

344

0.3724 – 1.7031mean 0.8949

Min.

0.3724

1st Qu.

0.7975

Median

0.896

Mean

0.8949

3rd Qu.

1.0195

Max.

1.7031

Std. dev

0.1922

Skewness

-0.1037

Kurtosis

1.058

Outliers

1310 low · 3 high

Longest gap

FT.ratio.of.Faridpur.Aberdeen

numeric

239

109

0.3459 – 1.2885mean 0.7711

Min.

0.3459

1st Qu.

0.6838

Median

0.772

Mean

0.7711

3rd Qu.

0.8671

Max.

1.2885

Std. dev

0.1568

Skewness

0.1447

Kurtosis

0.4196

Outliers

73 low · 4 high

Longest gap

Trailing

Culm.habit

numeric

1 – 9mean 4.228

Min.

1st Qu.

Median

Mean

4.2276

3rd Qu.

5.5

Max.

Std. dev

1.8355

Skewness

0.4406

Kurtosis

-0.5005

Longest gap

Leaf.pubescence

integer

125

0 – 1mean 0.8507

Min.

1st Qu.

Median

Mean

0.8507

3rd Qu.

Max.

Std. dev

0.357

Skewness

-1.958

Kurtosis

1.839

Zeros

Longest gap

Trailing

Flag.leaf.length

numeric

360

15.4167 – 49.4444mean 30.63

Min.

15.4167

1st Qu.

26.625

Median

30.05

Mean

30.6342

3rd Qu.

34.55

Max.

49.4444

Std. dev

5.7376

Skewness

0.4019

Kurtosis

0.0152

Outliers

20 low · 2 high

Longest gap

Flag.leaf.width

numeric

163

0.5917 – 1.8917mean 1.222

Min.

0.5917

1st Qu.

1.04

Median

1.1833

Mean

1.2217

3rd Qu.

1.4111

Max.

1.8917

Std. dev

0.2463

Skewness

0.2806

Kurtosis

-0.4214

Longest gap

Awn.presence

integer

0 – 1mean 0.2222

Min.

1st Qu.

Median

Mean

0.2222

3rd Qu.

Max.

Std. dev

0.4163

Skewness

1.331

Kurtosis

-0.2294

Zeros

287

Longest gap

Panicle.number.per.plant

numeric

286

2.2336 – 4.1718mean 3.247

Min.

2.2336

1st Qu.

2.9312

Median

3.2419

Mean

3.247

3rd Qu.

3.5577

Max.

4.1718

Std. dev

0.4134

Skewness

0.0079

Kurtosis

-0.7503

Longest gap

Plant.height

numeric

328

67.75 – 194.333mean 116.6

Min.

67.75

1st Qu.

99.75

Median

117.5

Mean

116.583

3rd Qu.

131.389

Max.

194.333

Std. dev

21.0925

Skewness

0.2274

Kurtosis

-0.1809

Outliers

20 low · 2 high

Longest gap

Panicle.length

numeric

354

15.6333 – 35.6833mean 24.37

Min.

15.6333

1st Qu.

22.2364

Median

24.1857

Mean

24.3749

3rd Qu.

26.4542

Max.

35.6833

Std. dev

3.5369

Skewness

0.2687

Kurtosis

0.0043

Outliers

71 low · 6 high

Longest gap

Primary.panicle.branch.number

numeric

171

5.5556 – 17mean 9.943

Min.

5.5556

1st Qu.

8.6667

Median

9.9167

Mean

9.9431

3rd Qu.

11.1111

Max.

Std. dev

1.7809

Skewness

0.2431

Kurtosis

0.1058

Outliers

10 low · 1 high

Longest gap

Seed.number.per.panicle

numeric

356

3.4447 – 5.6351mean 4.854

Min.

3.4447

1st Qu.

4.6792

Median

4.8878

Mean

4.8542

3rd Qu.

5.0542

Max.

5.6351

Std. dev

0.3299

Skewness

-0.604

Kurtosis

1.322

Outliers

1110 low · 1 high

Longest gap

Florets.per.panicle

numeric

363

3.9087 – 5.8364mean 5.056

Min.

3.9087

1st Qu.

4.8787

Median

5.0652

Mean

5.0561

3rd Qu.

5.258

Max.

5.8364

Std. dev

0.3234

Skewness

-0.3073

Kurtosis

0.4381

Outliers

76 low · 1 high

Longest gap

Panicle.fertility

numeric

208

0.372 – 0.98mean 0.824

Min.

0.372

1st Qu.

0.783

Median

0.853

Mean

0.824

3rd Qu.

0.8932

Max.

0.98

Std. dev

0.1049

Skewness

-1.541

Kurtosis

2.711

Outliers

1919 low · 0 high

Longest gap

Seed.length

numeric

377

5.8936 – 12.5489mean 8.4

Min.

5.8936

1st Qu.

7.6799

Median

8.3188

Mean

8.4003

3rd Qu.

9.1181

Max.

12.5489

Std. dev

0.9506

Skewness

0.3734

Kurtosis

0.1328

Outliers

10 low · 1 high

Longest gap

Seed.width

numeric

377

2.1958 – 3.9904mean 3.117

Min.

2.1958

1st Qu.

2.8188

Median

3.1569

Mean

3.1168

3rd Qu.

3.3982

Max.

3.9904

Std. dev

0.3902

Skewness

-0.1369

Kurtosis

-0.7055

Longest gap

Seed.volume

numeric

377

1.669 – 2.8719mean 2.278

Min.

1.669

1st Qu.

2.1175

Median

2.2799

Mean

2.2784

3rd Qu.

2.4544

Max.

2.8719

Std. dev

0.2404

Skewness

0.0296

Kurtosis

-0.4528

Longest gap

Seed.surface.area

numeric

377

3.4342 – 4.1982mean 3.781

Min.

3.4342

1st Qu.

3.6792

Median

3.7639

Mean

3.7808

3rd Qu.

3.8831

Max.

4.1982

Std. dev

0.144

Skewness

0.292

Kurtosis

-0.0975

Outliers

10 low · 1 high

Longest gap

Brown.rice.seed.length

numeric

377

4.0927 – 8.7837mean 6.117

Min.

4.0927

1st Qu.

5.5015

Median

5.9989

Mean

6.1172

3rd Qu.

6.7534

Max.

8.7837

Std. dev

0.7687

Skewness

0.2314

Kurtosis

-0.6075

Outliers

10 low · 1 high

Longest gap

Brown.rice.seed.width

numeric

377

1.8198 – 3.3575mean 2.627

Min.

1.8198

1st Qu.

2.3883

Median

2.6554

Mean

2.6266

3rd Qu.

2.8765

Max.

3.3575

Std. dev

0.3203

Skewness

-0.197

Kurtosis

-0.6778

Longest gap

Brown.rice.surface.area

numeric

377

2.9589 – 3.766mean 3.378

Min.

2.9589

1st Qu.

3.2842

Median

3.363

Mean

3.3778

3rd Qu.

3.4712

Max.

3.766

Std. dev

0.1349

Skewness

0.0544

Kurtosis

-0.1502

Outliers

21 low · 1 high

Longest gap

Brown.rice.volume

numeric

377

2.8415 – 9.8613mean 5.806

Min.

2.8415

1st Qu.

4.8061

Median

5.65

Mean

5.8062

3rd Qu.

6.7169

Max.

9.8613

Std. dev

1.2931

Skewness

0.3619

Kurtosis

-0.3095

Outliers

10 low · 1 high

Longest gap

Seed.length.width.ratio

numeric

340

1.799 – 4.467mean 2.752

Min.

1.799

1st Qu.

2.327

Median

2.651

Mean

2.7521

3rd Qu.

3.068

Max.

4.467

Std. dev

0.5541

Skewness

0.7352

Kurtosis

-0.1523

Outliers

40 low · 4 high

Longest gap

Brown.rice.length.width.ratio

numeric

332

1.502 – 3.878mean 2.382

Min.

1.502

1st Qu.

1.997

Median

2.287

Mean

2.3817

3rd Qu.

2.678

Max.

3.878

Std. dev

0.5185

Skewness

0.6765

Kurtosis

-0.2937

Outliers

30 low · 3 high

Longest gap

Seed.color

integer

0 – 1mean 0.0212

Min.

1st Qu.

Median

Mean

0.0212

3rd Qu.

Max.

Std. dev

0.1443

Skewness

6.618

Kurtosis

41.91

Zeros

369

Longest gap

Pericarp.color

integer

0 – 1mean 0.0902

Min.

1st Qu.

Median

Mean

0.0902

3rd Qu.

Max.

Std. dev

0.2868

Skewness

2.85

Kurtosis

6.139

Zeros

343

Longest gap

Straighthead.suseptability

numeric

110

2.33 – 9mean 6.936

Min.

2.33

1st Qu.

5.9983

Median

7.165

Mean

6.9355

3rd Qu.

8.1667

Max.

Std. dev

1.4301

Skewness

-0.5788

Kurtosis

-0.2749

Outliers

22 low · 0 high

Longest gap

Blast.resistance

integer

0 – 9mean 5.039

Min.

1st Qu.

Median

Mean

5.039

3rd Qu.

Max.

Std. dev

2.937

Skewness

-0.1009

Kurtosis

-1.443

Zeros

Longest gap

Amylose.content

numeric

376

0 – 27.9567mean 19.89

Min.

1st Qu.

16.6967

Median

21.13

Mean

19.885

3rd Qu.

23.97

Max.

27.9567

Std. dev

5.4628

Skewness

-1.39

Kurtosis

2.725

Zeros

Outliers

1212 low · 0 high

Alkali.spreading.value

numeric

115

2 – 7mean 5.974

Min.

1st Qu.

5.4028

Median

6.0833

Mean

5.9737

3rd Qu.

6.9375

Max.

Std. dev

1.0378

Skewness

-1.34

Kurtosis

2.135

Outliers

88 low · 0 high

Protein.content

numeric

6.5 – 14.1mean 8.593

Min.

6.5

1st Qu.

7.95

Median

8.45

Mean

8.5926

3rd Qu.

9.05

Max.

14.1

Std. dev

0.9403

Skewness

1.14

Kurtosis

3.117

Outliers

130 low · 13 high

Year07Flowering.time.at.Arkansas

numeric

102

53 – 150.5mean 86.65

Min.

1st Qu.

Median

84.5

Mean

86.6485

3rd Qu.

Max.

150.5

Std. dev

14.7493

Skewness

0.4837

Kurtosis

0.5148

Outliers

20 low · 2 high

Longest gap

Year06Flowering.time.at.Arkansas

numeric

184

56 – 117.167mean 88.62

Min.

1st Qu.

82.3333

Median

Mean

88.6208

3rd Qu.

95.5

Max.

117.167

Std. dev

11.8913

Skewness

0.0419

Kurtosis

0.2835

Outliers

1510 low · 5 high

Longest gap

geno

character

413

7 – 9 characters

The same data in this package under 1 other name

This package carries the same data under more than one name, identical down to the byte.

enhancerGTn_rice

The structure fingerprint found nothing beyond this list.

Version history

Version	Released	Size	Change	Stored as	Confidence
1.1.2	2026-10-05	413 × 39	Unchanged	rda · xz version 2 · 57 KB	exact
1.1.1	2026-04-12	413 × 39	Unchanged	rda · xz version 2 · 57 KB	exact
1.1.0	2025-11-17	413 × 39	–	rda · xz version 2 · 57 KB	exact