cutoffCosmicValid_abs_df

Cutoffs for a supervised analysis of mutational signatures.

Bundled with YAPSA · exported, loads via data()

Class

data.frame

Dimensions

10 × 30

Missing

Format

rda · gzip

version 2 · 3.1 KB

File

data/cutoffs.rda

Fingerprint

82c8233b

Source

Source not stated

About this object

Equal-length columns presented as a table, R's standard rectangular format. R object catalogue

Declared attributes

Row names

Yes

Columns

Column

Type

Distinct

Missing

Summary

AC1

numeric

AC2

numeric

0.0105 – 0.0405mean 0.0232

Min.

0.0105

1st Qu.

0.0105

Median

0.0227

Mean

0.0232

3rd Qu.

0.0349

Max.

0.0405

Std. dev

0.0136

Skewness

0.0406

Kurtosis

-2.13

Order

descending

AC3

numeric

0.0819 – 0.2002mean 0.1411

Min.

0.0819

1st Qu.

0.0819

Median

0.1411

Mean

0.1411

3rd Qu.

0.2002

Max.

0.2002

Std. dev

0.0623

Skewness

Kurtosis

-2.19

Order

descending

AC4

numeric

0.0175 – 0.0872mean 0.0311

Min.

0.0175

1st Qu.

0.0175

Median

0.0175

Mean

0.0311

3rd Qu.

0.0423

Max.

0.0872

Std. dev

0.024

Skewness

1.254

Kurtosis

0.1315

Outliers

10 low · 1 high

Order

descending

AC5

numeric

AC6

numeric

0.0015 – 0.0191mean 0.0051

Min.

0.0015

1st Qu.

0.0015

Median

0.0015

Mean

0.0051

3rd Qu.

0.0015

Max.

0.0191

Std. dev

0.0074

Skewness

1.281

Kurtosis

-0.3675

Order

descending

AC7

numeric

0.0401 – 0.6447mean 0.161

Min.

0.0401

1st Qu.

0.0401

Median

0.0401

Mean

0.161

3rd Qu.

0.0401

Max.

0.6447

Std. dev

0.2549

Skewness

1.281

Kurtosis

-0.3675

Order

descending

AC8

numeric

0.2428

AC9

numeric

0.1152

AC10

numeric

0.0101 – 0.2048mean 0.088

Min.

0.0101

1st Qu.

0.0101

Median

0.0101

Mean

0.088

3rd Qu.

0.2048

Max.

0.2048

Std. dev

0.1006

Skewness

0.3486

Kurtosis

-2.055

Order

descending

AC11

numeric

0.0992

AC12

numeric

0.2106

AC13

numeric

0.0079 – 0.0414mean 0.0146

Min.

0.0079

1st Qu.

0.0079

Median

0.0079

Mean

0.0146

3rd Qu.

0.0079

Max.

0.0414

Std. dev

0.0141

Skewness

1.281

Kurtosis

-0.3675

Order

descending

AC14

numeric

0.1443

AC15

numeric

0.038 – 0.0964mean 0.0497

Min.

0.038

1st Qu.

0.038

Median

0.038

Mean

0.0497

3rd Qu.

0.038

Max.

0.0964

Std. dev

0.0247

Skewness

1.281

Kurtosis

-0.3675

Order

descending

AC16

numeric

0.3674

AC17

numeric

0.0026 – 0.0815mean 0.0421

Min.

0.0026

1st Qu.

0.0026

Median

0.0421

Mean

0.0421

3rd Qu.

0.0815

Max.

0.0815

Std. dev

0.0416

Skewness

Kurtosis

-2.19

Order

descending

AC18

numeric

0.3325

AC19

numeric

0.1156

AC20

numeric

0.1235

AC21

numeric

0.164

AC22

numeric

0.031

AC23

numeric

0.0334

AC24

numeric

0.0324

AC25

numeric

0.0161

AC26

numeric

0.0138 – 0.0934mean 0.0615

Min.

0.0138

1st Qu.

0.0138

Median

0.0934

Mean

0.0615

3rd Qu.

0.0934

Max.

0.0934

Std. dev

0.0411

Skewness

-0.3486

Kurtosis

-2.055

Order

descending

AC27

numeric

0.0093 – 0.0145mean 0.0114

Min.

0.0093

1st Qu.

0.0093

Median

0.0093

Mean

0.0114

3rd Qu.

0.0145

Max.

0.0145

Std. dev

0.0027

Skewness

0.3486

Kurtosis

-2.055

Order

descending

AC28

numeric

0.0562

AC29

numeric

0.0594

AC30

numeric

0.0592

Same structure in 1 other dataset

These datasets share the same columns and types but hold different data.

YAPSAcutoffCosmicValid_rel_df

Version history

Version	Released	Size	Change	Stored as	Confidence
3.23	2026-04-28	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.22	2025-11-28	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.21	2025-04-15	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.20	2024-10-29	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.19	2024-04-30	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.18	2023-10-24	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.17	2023-09-25	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.16	2022-11-01	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.15	2022-04-26	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.14	2021-11-29	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.13	2021-05-19	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.12	2020-10-27	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.11	2020-04-27	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.10	2019-10-29	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.9	2019-05-02	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.8	2018-10-30	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.7	2018-04-30	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.6	2017-10-30	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.5	2017-04-24	10 × 30	Unchanged	rda · gzip version 2 · 3.1 KB	exact
3.4	2016-10-17	10 × 30	–	rda · gzip version 2 · 3.1 KB	exact