NCBI_ids
NCBI IDs Dataset
Bundled with TaxSEA · exported, loads via data()
Class
list
Elements
12,772
Missing
0
Format
rda · gzip
version 3 · 136 KB
File
data/NCBI_ids.rda
Fingerprint
c4d31e59
Format documented
Yes
Source
NCBI
About this object
R's general-purpose container. Elements can be any type and any size. R object catalogue
Structure
Distinct
2,234
Element length
0 – 3
Total length
12,452
Elements
Element
Type
Distinct
Missing
Summary
Eubacterium_sp.
character
1
0
6 characters
Eggerthella._sp.
character
1
0
7 characters
Slackia_equolifaciens
character
1
0
6 characters
Clostridium_sp.
character
1
0
4 characters
Subdoligranulum_sp.
character
1
0
7 characters
Firmicutes_bacterium
character
1
0
7 characters
Lactiplantibacillus_plantarum
character
1
0
4 characters
Dictyostelium_discoideum
character
1
0
5 characters
Eggerthella_sp.
character
1
0
7 characters
Lactobacillus_paracasei
character
1
0
4 characters
Bacillus_sp.
character
1
0
4 characters
Ruminococcus_
character
1
0
4 characters
Ruminococcaceae_
character
1
0
6 characters
Lactobacillus_
character
1
0
4 characters
Blautia_
character
1
0
6 characters
Intestinibacter_
character
1
0
7 characters
Bifidobacterium_
character
1
0
4 characters
Fusobacterium_sp.
character
1
0
5 characters
Parabacteroides_
character
1
0
6 characters
Hungatella_
character
1
0
7 characters
Faecalibacterium_
character
1
0
6 characters
Succinivibrio_
character
1
0
5 characters
Macrococcus_
character
1
0
5 characters
Bilophila_
character
1
0
5 characters
Enterococcus_
character
1
0
4 characters
Dorea_
character
1
0
6 characters
Clostridium_
character
1
0
4 characters
Photobacterium_angustum
character
1
0
3 characters
Catenibacillus_scindens
character
1
0
6 characters
Clostridium_orbiscindens
character
1
0
6 characters
Bacteroides_sp.
character
1
0
5 characters
CEBAS_4A1
NULL
–
–
empty
CEBAS_4A2
NULL
–
–
empty
CEBAS_4A3
NULL
–
–
empty
CEBAS_4A4
NULL
–
–
empty
Blautia_sp.
character
1
0
7 characters
Eubacterium_
character
1
0
4 characters
Coprococcus_
character
1
0
5 characters
Akkermansia_
character
1
0
6 characters
Eubacterium_dolichum
NULL
–
–
empty
Dermacoccus_
character
1
0
5 characters
Kocuria_
character
1
0
5 characters
Roseburia_
character
1
0
3 characters
Oscillibacter_
character
1
0
6 characters
Clostridium_IV
NULL
–
–
empty
Clostridium_XlVa
NULL
–
–
empty
Bififidobacterium_thetaiotaomicron
NULL
–
–
empty
Acinetobacter_
character
1
0
3 characters
Microbacterium_
character
1
0
5 characters
Dysgonomonas_
character
1
0
6 characters
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 12,772 elements | Data changed Class, Type, Missing and Distinct unchanged | rda · gzip version 3 · 136 KB | exact |
| 3.22 | 2025-10-29 | 6,386 elements | Data changed Distinct 2,100 → 2,234 | rda · gzip version 3 · 69 KB | exact |
| 3.21 | 2025-04-15 | 6,235 elements | – | rda · gzip version 3 · 67 KB | exact |
Class is the chain of classes R records on the object, most specific first. The facts above give the short name for the same chain. Type is what the values in it are. Missing is how many values were recorded as absent. Distinct is how many different values were counted in the object.