uvex2
Runs from simulations of interventions examples shown in the vignette. Most, but not all, are from intervention examples.
Bundled with OncoSimulR · exported, loads via data()
Class
oncosimul
oncosimul/oncosimul2
Elements
23
Missing
0
Format
rda · gzip
version 3 · 35 KB
File
data/uvex2.RData
Fingerprint
3189ec3f
Format documented
Yes
Source
Source not stated
Structure
Distinct
17
Nesting depth
3
Element length
0 – 470
Total length
523
Nested rows
2
Nested columns
4
Nested schema
varies between elements
Elements
Element
Type
Distinct
Missing
Summary
pops.by.timenumeric31100 – 79382·94 × 5 matrixmean 1.357e+4
Min.
0
1st Qu.
4
Median
15
Mean
13574.8
3rd Qu.
14042.2
Max.
79382
Std. dev
24939
Skewness
1.714
Kurtosis
1.356
Zeros
34
Outliers
800 low · 80 high
NumClones
numeric
1
0
4
TotalPopSize
numeric
1
0
79993
Genotypesinteger200 – 1·3 × 4 matrixmean 0.5
Min.
0
1st Qu.
0
Median
0.5
Mean
0.5
3rd Qu.
1
Max.
1
Std. dev
0.5222
Skewness
1.48e-16
Kurtosis
-2.16
Zeros
6
GenotypesWDistinctOrderEfflist40integer
Element class
integer
Element length
1 – 2
Total length
6
What is inside it
Element
Type
Distinct
Missing
Summary
[[1]]
integer
1
0
1
[[2]]integer201 – 2mean 1.5
Min.
1
1st Qu.
1.25
Median
1.5
Mean
1.5
3rd Qu.
1.75
Max.
2
Std. dev
0.7071
Order
ascending
[[3]]integer201 – 3mean 2
Min.
1
1st Qu.
1.5
Median
2
Mean
2
3rd Qu.
2.5
Max.
3
Std. dev
1.4142
Order
ascending
[[4]]
integer
1
0
2
GenotypesLabels
character
4
0
1 – 4 characters
MaxNumDrivers
integer
1
0
0
MaxDriversLast
integer
1
0
0
NumDriversLargestPop
integer
1
0
0
LargestClone
numeric
1
0
79382
PropLargestPopLast
numeric
1
0
0.9924
FinalTime
numeric
1
0
10
NumIter
integer
1
0
1194
HittedWallTime
logical
1
0
0 true·1 false
HittedMaxTries
logical
1
0
0 true·1 false
TotalPresentDrivers
integer
1
0
0
CountByDriver
integer
0
0
0 values
OccurringDrivers
character
1
0
0 characters·1 blank
otherlist120nested·2 rows nested·4 cols
Element length
0 – 1,001
Total length
1,026
Nesting depth
2
Nested rows
2
What is inside it
Element
Type
Distinct
Missing
Summary
attemptsUsed
integer
1
0
1
errorMF
numeric
1
0
0.0025
errorMF_size
numeric
1
0
0.0025
minDMratio
numeric
1
0
3338.39
minBMratio
numeric
1
0
5000
PhylogDFlist20nested
Element length
0 – 0
Total length
0
UnrecoverExcept
logical
1
0
0 true·1 false
numRecoverExcept
integer
1
0
0
accum_ti_dbl_min
integer
1
0
0
accum_ti_e3
integer
1
0
0
LOD_DFlist20character
Element class
character
Element length
2 – 2
Total length
4
interventionTimes
numeric
0
0
0 values
userVarNames
character
4
0
8 – 9 characters
userVarValueslist1,0010numeric
Element class
numeric
Element length
5 – 5
Total length
5,005
POM
character
2
0
1 characters
Drivers
integer
0
0
0 values
geneNames
character
3
0
1 characters
InitMutant1
character
1
0
1 characters
InitMutant2
character
1
0
1 characters
The nested tables do not share one set of columns, so there is no single schema to show.
Declared attributes
Other attributes
Read by name, kind and length, with the value where it is short enough to show. No rule here knows what any of them means.
| Attribute | Holds | Length | |
|---|---|---|---|
| call | object | 0 |
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 23 elements | Unchanged | rda · gzip version 3 · 35 KB | exact |
| 3.22 | 2025-10-29 | 23 elements | Unchanged | rda · gzip version 3 · 35 KB | exact |
| 3.21 | 2025-04-15 | 23 elements | Unchanged | rda · gzip version 3 · 35 KB | exact |
| 3.20 | 2024-10-29 | 23 elements | Unchanged | rda · gzip version 3 · 35 KB | exact |
| 3.19 | 2024-10-09 | 23 elements | Unchanged | rda · gzip version 3 · 35 KB | exact |
| 3.18 | 2023-10-24 | 23 elements | Unchanged | rda · gzip version 3 · 35 KB | exact |
| 3.17 | 2023-04-25 | 23 elements | Unchanged | rda · gzip version 3 · 35 KB | exact |
| 3.16 | 2023-02-20 | 23 elements | – | rda · gzip version 3 · 35 KB | exact |