s_3_b
Runs from simulations of interventions examples shown in the vignette. Most, but not all, are from intervention examples.
Bundled with OncoSimulR · exported, loads via data()
Class
oncosimul
oncosimul/oncosimul2
Elements
22
Missing
0
Format
rda · gzip
version 3 · 2.4 KB
File
data/s_3_b.RData
Fingerprint
801eb3e9
Format documented
Yes
Source
Source not stated
Structure
Distinct
15
Nesting depth
3
Element length
0 – 500
Total length
551
Nested rows
3
Nested columns
4
Nested schema
varies between elements
Elements
Element
Type
Distinct
Missing
Summary
pops.by.timenumeric42500 – 5101·100 × 5 matrixmean 1071
Min.
0
1st Qu.
40.9188
Median
288
Mean
1071.07
3rd Qu.
1640.75
Max.
5101
Std. dev
1539.16
Skewness
1.505
Kurtosis
0.9223
Zeros
17
Outliers
510 low · 51 high
NumClones
numeric
1
0
4
TotalPopSize
numeric
1
0
5833
Genotypesinteger200 – 1·3 × 4 matrixmean 0.25
Min.
0
1st Qu.
0
Median
0
Mean
0.25
3rd Qu.
0.25
Max.
1
Std. dev
0.4523
Skewness
1.013
Kurtosis
-1.039
Zeros
9
Outliers
30 low · 3 high
GenotypesWDistinctOrderEfflist40integer
Element class
integer
Element length
0 – 1
Total length
3
What is inside it
Element
Type
Distinct
Missing
Summary
[[1]]
integer
0
0
0 values
[[2]]
integer
1
0
1
[[3]]
integer
1
0
2
[[4]]
integer
1
0
3
GenotypesLabels
character
4
0
0 – 1 characters·1 blank
MaxNumDrivers
integer
1
0
0
MaxDriversLast
integer
1
0
0
NumDriversLargestPop
integer
1
0
0
LargestClone
numeric
1
0
3154
PropLargestPopLast
numeric
1
0
0.5407
FinalTime
numeric
1
0
100
NumIter
integer
1
0
4133
HittedWallTime
logical
1
0
0 true·1 false
HittedMaxTries
logical
1
0
0 true·1 false
TotalPresentDrivers
integer
1
0
0
CountByDriver
integer
0
0
0 values
OccurringDrivers
character
1
0
0 characters·1 blank
otherlist110nested·3 rows nested·4 cols
Element length
0 – 6
Total length
25
Nesting depth
2
Nested rows
3
What is inside it
Element
Type
Distinct
Missing
Summary
attemptsUsed
integer
1
0
1
errorMF
numeric
1
0
0.0067
errorMF_size
numeric
1
0
0.0068
minDMratio
numeric
1
0
3242.34
minBMratio
numeric
1
0
3333.33
PhylogDFlist20nested
Element length
0 – 0
Total length
0
UnrecoverExcept
logical
1
0
0 true·1 false
numRecoverExcept
integer
1
0
0
accum_ti_dbl_min
integer
1
0
0
accum_ti_e3
integer
1
0
0
LOD_DFlist20character
Element class
character
Element length
3 – 3
Total length
6
interventionTimes
numeric
0
0
0 values
userVarNames
character
4
0
8 – 9 characters
POM
character
2
0
0 – 1 characters·3 blank
Drivers
integer
0
0
0 values
geneNames
character
3
0
1 characters
InitMutant
character
1
0
0 characters·1 blank
The nested tables do not share one set of columns, so there is no single schema to show.
Declared attributes
Other attributes
Read by name, kind and length, with the value where it is short enough to show. No rule here knows what any of them means.
| Attribute | Holds | Length | |
|---|---|---|---|
| call | object | 0 |
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 22 elements | Unchanged | rda · gzip version 3 · 2.4 KB | exact |
| 3.22 | 2025-10-29 | 22 elements | Unchanged | rda · gzip version 3 · 2.4 KB | exact |
| 3.21 | 2025-04-15 | 22 elements | Unchanged | rda · gzip version 3 · 2.4 KB | exact |
| 3.20 | 2024-10-29 | 22 elements | Unchanged | rda · gzip version 3 · 2.4 KB | exact |
| 3.19 | 2024-10-09 | 22 elements | Unchanged | rda · gzip version 3 · 2.4 KB | exact |
| 3.18 | 2023-10-24 | 22 elements | Unchanged | rda · gzip version 3 · 2.4 KB | exact |
| 3.17 | 2023-04-25 | 22 elements | Unchanged | rda · gzip version 3 · 2.4 KB | exact |
| 3.16 | 2023-02-20 | 22 elements | – | rda · gzip version 3 · 2.4 KB | exact |