atex5
Runs from simulations of interventions examples shown in the vignette. Most, but not all, are from intervention examples.
Bundled with OncoSimulR · exported, loads via data()
Class
oncosimul
oncosimul/oncosimul2
Elements
24
Missing
0
Format
rda · gzip
version 3 · 10 KB
File
data/atex5.RData
Fingerprint
3e1cb66d
Format documented
Yes
Source
Source not stated
Structure
Distinct
18
Nesting depth
3
Element length
0 – 2,984
Total length
3,027
Nested rows
1
Nested columns
4
Nested schema
varies between elements
Elements
Element
Type
Distinct
Missing
Summary
pops.by.timenumeric2,33400 – 10085·746 × 4 matrixmean 2080
Min.
0
1st Qu.
236.125
Median
1083.56
Mean
2079.96
3rd Qu.
3792.5
Max.
10085
Std. dev
2380.91
Skewness
1.195
Kurtosis
0.2008
Zeros
36
Outliers
40 low · 4 high
NumClones
numeric
1
0
3
TotalPopSize
numeric
1
0
6703
Genotypesinteger200 – 1·2 × 3 matrixmean 0.3333
Min.
0
1st Qu.
0
Median
0
Mean
0.3333
3rd Qu.
0.75
Max.
1
Std. dev
0.5164
Skewness
0.5379
Kurtosis
-1.958
Zeros
4
GenotypesWDistinctOrderEfflist30integer
Element class
integer
Element length
0 – 1
Total length
2
What is inside it
Element
Type
Distinct
Missing
Summary
[[1]]
integer
0
0
0 values
[[2]]
integer
1
0
1
[[3]]
integer
1
0
2
GenotypesLabels
character
3
0
0 – 1 characters·1 blank
MaxNumDrivers
integer
1
0
0
MaxDriversLast
integer
1
0
0
NumDriversLargestPop
integer
1
0
0
LargestClone
numeric
1
0
4447
PropLargestPopLast
numeric
1
0
0.6634
FinalTime
numeric
1
0
1500
NumIter
integer
1
0
61936
HittedWallTime
logical
1
0
0 true·1 false
HittedMaxTries
logical
1
0
0 true·1 false
TotalPresentDrivers
integer
1
0
0
CountByDriver
integer
0
0
0 values
OccurringDrivers
character
1
0
0 characters·1 blank
otherlist90nested·1 rows nested·4 cols
Element length
1 – 21
Total length
40
Nesting depth
2
Nested rows
1
What is inside it
Element
Type
Distinct
Missing
Summary
attemptsUsed
integer
1
0
1
errorMF
numeric
1
0
0.0435
errorMF_size
numeric
1
0
0.0455
minDMratio
numeric
1
0
5000
minBMratio
numeric
1
0
5000
PhylogDFlist20nested
Element length
0 – 0
Total length
0
UnrecoverExcept
logical
1
0
0 true·1 false
numRecoverExcept
integer
1
0
0
accum_ti_dbl_min
integer
1
0
0
accum_ti_e3
integer
1
0
0
LOD_DFlist20character
Element class
character
Element length
1 – 1
Total length
2
userVarNames
character
4
0
7 – 16 characters
POM
character
2
0
0 – 1 characters·11 blank
Drivers
integer
0
0
0 values
geneNames
character
2
0
1 characters
InitMutant1
character
1
0
2 characters
InitMutant2
character
1
0
1 characters
InitMutant3
character
1
0
1 characters
The nested tables do not share one set of columns, so there is no single schema to show.
Declared attributes
Other attributes
Read by name, kind and length, with the value where it is short enough to show. No rule here knows what any of them means.
| Attribute | Holds | Length | |
|---|---|---|---|
| call | object | 0 |
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 24 elements | Unchanged | rda · gzip version 3 · 10 KB | exact |
| 3.22 | 2025-10-29 | 24 elements | Unchanged | rda · gzip version 3 · 10 KB | exact |
| 3.21 | 2025-04-15 | 24 elements | Unchanged | rda · gzip version 3 · 10 KB | exact |
| 3.20 | 2024-10-29 | 24 elements | Unchanged | rda · gzip version 3 · 10 KB | exact |
| 3.19 | 2024-10-09 | 24 elements | Unchanged | rda · gzip version 3 · 10 KB | exact |
| 3.18 | 2023-10-24 | 24 elements | Unchanged | rda · gzip version 3 · 10 KB | exact |
| 3.17 | 2023-04-25 | 24 elements | Unchanged | rda · gzip version 3 · 10 KB | exact |
| 3.16 | 2023-02-20 | 24 elements | – | rda · gzip version 3 · 10 KB | exact |