variants_subset_d50_chr1
Bundled with MutSeqR · provided in inst/extdata, read by path with system.file()
Class
tibble
tbl_df/tbl/data.frame
Dimensions
189 × 44
Missing
0
Format
rds · gzip
version 3 · 8.3 KB
File
inst/extdata/Example_files/variants_subset_d50_chr1.rds
Fingerprint
0d811bb3
About this object
A tibble: a data.frame that prints compactly, never converts strings to factors, never adds row names, and can hold list columns. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
factor10chr1189+18 more
chr1189+18 more
Levels
19
Used
1
Unused
18
Rows per level, the 1 commonest of 19
chr1189
integer156069304276 – 69306586mean 6.931e+7
Min.
69304276
1st Qu.
69305000
Median
69305647
Mean
6.93055e+7
3rd Qu.
69306077
Max.
69306586
Std. dev
638.894
Skewness
-0.3556
Kurtosis
-1.125
integer158069304276 – 69306588mean 6.931e+7
Min.
69304276
1st Qu.
69305000
Median
69305647
Mean
6.93055e+7
3rd Qu.
69306077
Max.
69306588
Std. dev
638.899
Skewness
-0.3554
Kurtosis
-1.126
integer301 – 3mean 1.095
Min.
1
1st Qu.
1
Median
1
Mean
1.0952
3rd Qu.
1
Max.
3
Std. dev
0.3443
Skewness
3.82
Kurtosis
14.9
factor10*189+2 more
*189+2 more
Levels
3
Used
1
Unused
2
Rows per level, the 1 commonest of 3
*189
integer1501 – 34mean 2.466
Min.
1
1st Qu.
1
Median
1
Mean
2.4656
3rd Qu.
3
Max.
34
Std. dev
3.9065
Skewness
5.178
Kurtosis
32.35
Outliers
110 low · 11 high
integer18609760 – 21002mean 1.547e+4
Min.
9760
1st Qu.
13675
Median
15740
Mean
15470.2
3rd Qu.
16829
Max.
21002
Std. dev
2631.88
Skewness
-0.1393
Kurtosis
-0.5009
integer133045 – 756mean 189.5
Min.
45
1st Qu.
112
Median
157
Mean
189.466
3rd Qu.
228
Max.
756
Std. dev
111.134
Skewness
1.881
Kurtosis
4.61
Outliers
110 low · 11 high
integer18709292 – 20855mean 1.528e+4
Min.
9292
1st Qu.
13516
Median
15575
Mean
15278.3
3rd Qu.
16682
Max.
20855
Std. dev
2649.2
Skewness
-0.1609
Kurtosis
-0.4511
numeric18700 – 20856mean 1.504e+4
Min.
0
1st Qu.
13326
Median
15503
Mean
15037.8
3rd Qu.
16589
Max.
20856
Std. dev
3244.9
Skewness
-1.514
Kurtosis
5.431
Zeros
3
Outliers
33 low · 0 high
integer301 – 3mean 1.095
Min.
1
1st Qu.
1
Median
1
Mean
1.0952
3rd Qu.
1
Max.
3
Std. dev
0.3443
Skewness
3.82
Kurtosis
14.9
integer501 – 756mean 6.651
Min.
1
1st Qu.
1
Median
1
Mean
6.6508
3rd Qu.
1
Max.
756
Std. dev
59.172
Skewness
11.44
Kurtosis
136.6
integer50-1 – 755mean 6.492
Min.
-1
1st Qu.
1
Median
1
Mean
6.4921
3rd Qu.
1
Max.
755
Std. dev
59.0938
Skewness
11.45
Kurtosis
136.7
numeric18900 – 0.0019mean 0.0002
Min.
0
1st Qu.
0.0001
Median
0.0001
Mean
0.0002
3rd Qu.
0.0002
Max.
0.0019
Std. dev
0.0002
Skewness
4.845
Kurtosis
27.43
Outliers
160 low · 16 high
numeric400 – 1mean 0.612
Min.
0
1st Qu.
0.3333
Median
0.6667
Mean
0.612
3rd Qu.
0.6667
Max.
1
Std. dev
0.2572
Skewness
-0.1969
Kurtosis
-0.4382
Zeros
7