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A.rna

Gene expression data from yeast

Bundled with MultiBaC · exported, loads via data()

Class
matrix
Dimensions
200 × 6
Missing
0
Format
rda · gzip
version 2 · 42 KB
File
data/multiyeast.rda
Fingerprint
abdec0ce
Format documented
Yes
Source
Gene Expression Omnimus: GSE11521
About this object
A flat block of values with dimensionsA block of cells sharing every edge, with nothing above the columns and nothing in it: a name here is hung on the whole block rather than on one column.

A single vector with a dim attribute. All elements share one type. R object catalogue

Values

Computed over every cell in the object, reading it as one vector.

numeric
Cells
1,200
Missing
0
Min.
-1.2816
1st Qu.
5.71088
Median
6.96296
Mean
6.90753
3rd Qu.
8.16803
Max.
12.8845
Std. dev
2.02117
Distinct
1,189
Skewness
-0.5131
Kurtosis
1.368
Zeros
11 0.92%
Outliers
30 25 low · 5 high
Margins

The mean of each row, and of each column, summarised. Reading every cell as one vector gives a matrix and its transpose the same answer; these do not.

MarginMin.1st Qu.MedianMean3rd Qu.Max.Std. dev
Rows1.21255.84996.96446.90758.015911.7021.8546
Columns6.68126.78176.94316.90757.02737.09450.16741

The row means vary far more than the column means, so what separates the values runs down the rows.

Dimensions and labels
MarginLabelsCount
RowsYOR324C, YGL104C, YOR142W, YOR052C, YGR038W, YER087W, YFL034C-B, YOR012W, YEL017W, YCR011C, YER024W, YEL025C, …200
ColumnsA.rna_Glu+_1, A.rna_Glu+_2, A.rna_Glu+_3, A.rna_Glu-_1, A.rna_Glu-_2, A.rna_Glu-_36
Columns

This object is 6 columns wide. A matrix carries no per-column schema, so its width is what the catalogue records and there is nothing to list one column at a time. What it holds is described whole instead, summarised over every cell: see Values and Margins above.

Structure fingerprint

30 other datasets carry the same structure fingerprint. That fingerprint is a digest of the column names and their types, and a matrix carries neither, so on one it comes down to the width and the type held: a match is another object of 6 columns holding the same type rather than one with the same columns. The datasets are not listed, because that is not a list of anything this one is related to.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-28200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.222025-10-29200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.212025-04-15200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.202024-10-29200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.192024-04-30200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.182023-10-24200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.172023-04-25200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.162022-11-01200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.152022-04-26200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.142021-10-26200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.132021-05-19200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.122020-10-27200 × 6–rda · gzip
version 2 · 42 KB
exact

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