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A.gro

Transcription rate data from yeast

Bundled with MultiBaC · exported, loads via data()

Class
matrix
Dimensions
200 × 6
Missing
0
Format
rda · gzip
version 2 · 42 KB
File
data/multiyeast.rda
Fingerprint
85fe76f7
Format documented
Yes
Source
Gene Expression Omnimus: GSE11521
About this object
A flat block of values with dimensionsA block of cells sharing every edge, with nothing above the columns and nothing in it: a name here is hung on the whole block rather than on one column.

A single vector with a dim attribute. All elements share one type. R object catalogue

Values

Computed over every cell in the object, reading it as one vector.

numeric
Cells
1,200
Missing
0
Min.
4.60364
1st Qu.
7.47736
Median
8.22592
Mean
8.22117
3rd Qu.
8.98585
Max.
12.6776
Std. dev
1.10474
Distinct
1,200
Skewness
-0.006626
Kurtosis
0.2598
Outliers
13 8 low · 5 high
Margins

The mean of each row, and of each column, summarised. Reading every cell as one vector gives a matrix and its transpose the same answer; these do not.

MarginMin.1st Qu.MedianMean3rd Qu.Max.Std. dev
Rows6.0727.53778.24478.22128.841211.5830.91457
Columns7.39168.00088.36998.22128.57418.67570.4931

The row means and the column means vary by a similar amount, so neither margin carries the structure on its own.

Dimensions and labels
MarginLabelsCount
RowsYOR324C, YGL104C, YOR142W, YOR052C, YGR038W, YER087W, YFL034C-B, YOR012W, YEL017W, YCR011C, YER024W, YEL025C, …200
ColumnsA.gro_Glu+_1, A.gro_Glu+_2, A.gro_Glu+_3, A.gro_Glu-_1, A.gro_Glu-_2, A.gro_Glu-_36
Columns

This object is 6 columns wide. A matrix carries no per-column schema, so its width is what the catalogue records and there is nothing to list one column at a time. What it holds is described whole instead, summarised over every cell: see Values and Margins above.

Structure fingerprint

30 other datasets carry the same structure fingerprint. That fingerprint is a digest of the column names and their types, and a matrix carries neither, so on one it comes down to the width and the type held: a match is another object of 6 columns holding the same type rather than one with the same columns. The datasets are not listed, because that is not a list of anything this one is related to.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-28200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.222025-10-29200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.212025-04-15200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.202024-10-29200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.192024-04-30200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.182023-10-24200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.172023-04-25200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.162022-11-01200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.152022-04-26200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.142021-10-26200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.132021-05-19200 × 6Unchangedrda · gzip
version 2 · 42 KB
exact
3.122020-10-27200 × 6–rda · gzip
version 2 · 42 KB
exact

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