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EAGenes

Information about genes

Bundled with MoonlightR · exported, loads via data()

Class
data.frame
Dimensions
20,038 × 5
Missing
0
Format
rda · bzip2
version 2 · 344 KB
File
data/EAGenes.rda
Fingerprint
7a35c85d
Format documented
Yes
Source
Source not stated
About this object
A table with named columnsA bordered table: a header band ruled off from the body with an empty slot over each column where its name goes, and rows of cells under it that share every edge. Nothing is in any of them.

Equal-length columns presented as a table, R's standard rectangular format. R object catalogue

Declared attributes
Row names
Yes
Columns
Column
Type
Distinct
Missing
Summary
ID
factor
20,038
0
A1BG1A1CF1A2LD11A2M1A2ML11A4GALT1+20,032 more
Levels
20,038
Used
20,038
Rows per level, the 50 commonest of 20,038
A1BG1A1CF1A2LD11A2M1A2ML11A4GALT1A4GNT1AAAS1AACS1AACSL1AADAC1AADACL21AADACL31AADACL41AADAT1AAGAB1AAK11AAMP1AANAT1AARS1AARS21AARSD11AASDH1AASDHPPT1AASS1AATF1AATK1ABAT1ABCA11ABCA101ABCA11P1ABCA121ABCA131ABCA17P1ABCA21ABCA31ABCA41ABCA51ABCA61ABCA71ABCA81ABCA91ABCB11ABCB101ABCB111ABCB41ABCB51ABCB61ABCB71ABCB81
Gene
factor
19,823
0
HIST1H4A (includes others)*13GAGE1 (includes others)*10HIST1H3A (includes others)*10CT47A6 (includes others)*7AGAP6 (includes others)*6HIST2H2BE (includes others)*6+19,817 more
Levels
19,823
Used
19,823
Rows per level, the 50 commonest of 19,823
HIST1H4A (includes others)*13GAGE1 (includes others)*10HIST1H3A (includes others)*10CT47A6 (includes others)*7AGAP6 (includes others)*6HIST2H2BE (includes others)*6NBPF10 (includes others)*6RGPD3 (includes others)*6CT45A6 (includes others)*5PPIAL4G (includes others)*5RBMY1A1 (includes others)*5TBC1D3 (includes others)*5GOLGA6C (includes others)*4HIST1H2AM (includes others)*4PRR20A (includes others)*4SPATA31A6 (includes others)*4TSPY1 (includes others)*4UGT1A9 (includes others)*4ANXA8L2 (includes others)*3CALM1 (includes others)*3CDY1 (includes others)*3CGB (includes others)*3CLEC18A (includes others)*3CTAGE9 (includes others)*3LCE2B (includes others)*3LRRC37A3 (includes others)*3NOMO1 (includes others)*3OR4F17 (includes others)*3PGA5 (includes others)*3PRAMEF1 (includes others)*3SPANXC (includes others)*3VCX (includes others)*3AKR1C1/AKR1C2*2ANKRD20A4 (includes others)*2APOL3/APOL4*2AQP12A/AQP12B*2ARHGAP27*2ARHGAP8/PRR5-ARHGAP8*2ATAD3A/ATAD3B*2C2orf27A/C2orf27B*2CBWD3/CBWD6*2CCL3L1/CCL3L3*2CCZ1/CCZ1B*2CDK11A/CDK11B*2CKMT1A/CKMT1B*2CSAG2/CSAG3*2CSH1/CSH2*2CXorf40A/CXorf40B*2DAZ1/DAZ4*2DMRTC1/DMRTC1B*2
Description
factor
19,814
0
histone cluster 1, H4a13G antigen 110histone cluster 1, H3a10cancer/testis antigen family 47, member A107ArfGAP with GTPase domain, ankyrin repeat and PH domain 66histone cluster 2, H2be6+19,808 more
Levels
19,814
Used
19,814
Rows per level, the 50 commonest of 19,814
histone cluster 1, H4a13G antigen 110histone cluster 1, H3a10cancer/testis antigen family 47, member A107ArfGAP with GTPase domain, ankyrin repeat and PH domain 66histone cluster 2, H2be6neuroblastoma breakpoint family, member 156RANBP2-like and GRIP domain containing 56cancer/testis antigen family 45, member A25peptidylprolyl isomerase A (cyclophilin A)-like 4E5RNA binding motif protein, Y-linked, family 1, member A15TBC1 domain family, member 35golgin A6 family, member C4histone cluster 1, H2ag4proline rich 20A4SPATA31 subfamily A, member 34testis specific protein, Y-linked 14UDP glucuronosyltransferase 1 family, polypeptide A84annexin A8-like 23calmodulin 1 (phosphorylase kinase, delta)3chorionic gonadotropin, beta polypeptide3chromodomain protein, Y-linked, 13CTAGE family, member 93C-type lectin domain family 18, member A3late cornified envelope 2C3leucine rich repeat containing 37, member A33NODAL modulator 13olfactory receptor, family 4, subfamily F, member 43pepsinogen 5, group I (pepsinogen A)3PRAME family member 13smg-1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) pseudogene3SPANX family, member C3variable charge, X-linked 3A3acyloxyacyl hydrolase (neutrophil)2aldo-keto reductase family 1, member C22ankyrin repeat domain 20 family, member A32apolipoprotein L, 42aquaporin 12A2ATPase family, AAA domain containing 3A2CCZ1 vacuolar protein trafficking and biogenesis associated homolog B (S. cerevisiae)2chemokine (C-C motif) ligand 3-like 12chorionic somatomammotropin hormone 1 (placental lactogen)2chromosome 2 open reading frame 27A2chromosome X open reading frame 40A2COBW domain containing 62creatine kinase, mitochondrial 1B2CSAG family, member 22cyclin-dependent kinase 11B2D-dopachrome tautomerase-like2deleted in azoospermia 12
Location
factor
5
0
Other5,717Cytoplasm5,578Nucleus3,918Plasma Membrane3,169Extracellular Space1,656
Family
factor
14
0
other11,286enzyme2,875transcription regulator1,495transporter1,020kinase731G-protein coupled receptor707+8 more
Levels
14
Used
14
Rows per level
other11,286enzyme2,875transcription regulator1,495transporter1,020kinase731G-protein coupled receptor707peptidase505transmembrane receptor358ion channel333phosphatase266cytokine177growth factor132translation regulator107ligand-dependent nuclear receptor46
The same data in 2 other packages

This data is identical to the data these packages carry, down to the byte.

Moonlight2RTCGAbiolinks

The structure fingerprint found nothing beyond this list.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-2820,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.222025-10-2920,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.212025-04-1520,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.202024-10-2920,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.192024-04-3020,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.182023-10-2420,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.172023-08-0320,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.162022-11-0120,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.152022-04-2620,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.142021-10-2620,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.132021-05-1920,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.122020-10-2720,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.112020-07-0820,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.102019-10-2920,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.92019-10-1020,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.82018-10-3020,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.72018-05-2520,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.62017-10-3020,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.52017-04-2420,038 × 5Unchangedrda · bzip2
version 2 · 344 KB
exact
3.42016-10-1720,038 × 5–rda · bzip2
version 2 · 344 KB
exact

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