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dataURA

Upstream regulator analysis

Bundled with Moonlight2R · exported, loads via data()

Class
matrix
Dimensions
20 × 2
Missing
0
Format
rda · bzip2
version 3 · 738 B
File
data/dataURA.rda
Fingerprint
b1c944c3
Format documented
Yes
Source
Source not stated
About this object
A flat block of values with dimensionsA block of cells sharing every edge, with nothing above the columns and nothing in it: a name here is hung on the whole block rather than on one column.

A single vector with a dim attribute. All elements share one type. R object catalogue

Values

Computed over every cell in the object, reading it as one vector.

numeric
Cells
40
Missing
0
Min.
-0.866025
1st Qu.
0.967936
Median
1.68218
Mean
1.42469
3rd Qu.
2.02597
Max.
2.6295
Std. dev
0.892016
Distinct
40
Skewness
-1.017
Kurtosis
0.05039
Outliers
1 1 low · 0 high
Margins

The mean of each row, and of each column, summarised. Reading every cell as one vector gives a matrix and its transpose the same answer; these do not.

MarginMin.1st Qu.MedianMean3rd Qu.Max.Std. dev
Rows-0.171351.3761.60991.42471.68952.15990.62429
Columns1.41561.42011.42471.42471.42921.43380.012886

The row means vary far more than the column means, so what separates the values runs down the rows.

Dimensions and labels
MarginLabelsCount
RowsDPY30, GPR132, PHKG2, PDE2A, FAM155A, CHML, TNNC1, GREM2, HSPA12A, ASRGL1, TBC1D9, IGSF10, …20
Columnsapoptosis, proliferation of cells2
Columns

This object is 2 columns wide. A matrix carries no per-column schema, so its width is what the catalogue records and there is nothing to list one column at a time. What it holds is described whole instead, summarised over every cell: see Values and Margins above.

Structure fingerprint

30 other datasets carry the same structure fingerprint. That fingerprint is a digest of the column names and their types, and a matrix carries neither, so on one it comes down to the width and the type held: a match is another object of 2 columns holding the same type rather than one with the same columns. The datasets are not listed, because that is not a list of anything this one is related to.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-06-3020 × 2Data changed
Dimensions 23 × 2 → 20 × 2 · Distinct 41 → 40 · Value summary
rda · bzip2
version 3 · 738 B
exact
3.222025-12-0923 × 2Unchangedrda · gzip
version 3 · 609 B
exact
3.212025-10-1023 × 2Unchangedrda · gzip
version 3 · 609 B
exact
3.202024-10-2923 × 2Unchangedrda · gzip
version 3 · 609 B
exact
3.192024-04-3023 × 2Unchangedrda · gzip
version 3 · 609 B
exact
3.182023-10-2423 × 2–rda · gzip
version 3 · 609 B
exact

Dimensions is the row and column count. Distinct is how many different values were counted in the object. Value summary is the six-number summary of the values and their spread.

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