annotation.pd
Example of annotation file for raw.pd, which is the PSM output of Proteome Discoverer
Bundled with MSstatsTMT · exported, loads via data()
Class
data.frame
Dimensions
150 × 7
Missing
0
Format
rda · gzip
version 3 · 594 B
File
data/annotation.pd.rda
Fingerprint
712cebb3
Format documented
Yes
Source
Source not stated
About this object
Equal-length columns presented as a table, R's standard rectangular format. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
factor150161117_SILAC_HeLa_UPS1_TMT10_Mixture1_01.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture1_02.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture1_03.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture2_01.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture2_02.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture2_03.raw10+9 more
161117_SILAC_HeLa_UPS1_TMT10_Mixture1_01.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture1_02.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture1_03.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture2_01.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture2_02.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture2_03.raw10+9 more
Levels
15
Used
15
Rows per level
161117_SILAC_HeLa_UPS1_TMT10_Mixture1_01.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture1_02.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture1_03.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture2_01.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture2_02.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture2_03.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture3_01.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture3_02.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture3_03.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture4_01.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture4_02.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture4_03.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture5_01.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture5_02.raw10161117_SILAC_HeLa_UPS1_TMT10_Mixture5_03.raw10
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 150 × 7 | Unchanged | rda · gzip version 3 · 594 B | exact |
| 3.22 | 2025-10-29 | 150 × 7 | Unchanged | rda · gzip version 3 · 594 B | exact |
| 3.21 | 2025-04-15 | 150 × 7 | Unchanged | rda · gzip version 3 · 594 B | exact |
| 3.20 | 2025-03-05 | 150 × 7 | Unchanged | rda · gzip version 3 · 594 B | exact |
| 3.19 | 2024-05-20 | 150 × 7 | Data changed Dimensions, Class and Missing unchanged | rda · gzip version 3 · 594 B | exact |
| 3.18 | 2023-10-24 | 150 × 7 | Unchanged | rda · gzip version 3 · 741 B | exact |
| 3.17 | 2023-04-25 | 150 × 7 | Unchanged | rda · gzip version 3 · 741 B | exact |
| 3.16 | 2023-02-26 | 150 × 7 | Unchanged | rda · gzip version 3 · 741 B | exact |
| 3.15 | 2022-09-12 | 150 × 7 | Unchanged | rda · gzip version 3 · 741 B | exact |
| 3.14 | 2022-02-18 | 150 × 7 | Unchanged | rda · gzip version 3 · 741 B | exact |
| 3.13 | 2021-06-14 | 150 × 7 | Unchanged | rda · gzip version 3 · 741 B | exact |
| 3.12 | 2020-12-20 | 150 × 7 | Unchanged | rda · gzip version 3 · 741 B | exact |
| 3.11 | 2020-10-13 | 150 × 7 | Unchanged | rda · gzip version 3 · 741 B | exact |
| 3.10 | 2020-04-14 | 150 × 7 | Unchanged | rda · gzip version 3 · 741 B | exact |
| 3.9 | 2019-05-04 | 150 × 7 | Data changed Dimensions 150 × 5 → 150 × 7 | rda · gzip version 3 · 741 B | exact |
| 3.8 | 2019-02-25 | 150 × 5 | – | rda · bzip2 version 2 · 1.1 KB | exact |
Dimensions is the row and column count. Class is the chain of classes R records on the object, most specific first. The facts above give the short name for the same chain. Missing is how many values were recorded as absent.