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ipl

Bundled with MPAC · provided in inst/extdata, read by path with system.file()

Class
matrix
Dimensions
8 × 71
Missing
0
Format
rds · gzip
version 3 · 2.5 KB
File
inst/extdata/pltSttKM/ipl.rds
Fingerprint
9126c3be
About this object
A flat block of values with dimensionsA block of cells sharing every edge, with nothing above the columns and nothing in it: a name here is hung on the whole block rather than on one column.

A single vector with a dim attribute. All elements share one type. R object catalogue

Values

Computed over every cell in the object, reading it as one vector.

numeric
Cells
568
Missing
0
Min.
-1.6136
1st Qu.
0
Median
0
Mean
0.157087
3rd Qu.
0.390189
Max.
1.4597
Std. dev
0.292349
Distinct
255
Skewness
-0.7256
Kurtosis
7.22
Zeros
313 55.1%
Outliers
13 10 low · 3 high
Margins

The mean of each row, and of each column, summarised. Reading every cell as one vector gives a matrix and its transpose the same answer; these do not.

MarginMin.1st Qu.MedianMean3rd Qu.Max.Std. dev
Rows0.016290.118770.165120.157090.201780.302010.091372
Columns-0.3153900.148170.157090.291260.511640.16258

The row means and the column means vary by a similar amount, so neither margin carries the structure on its own.

Dimensions and labels
MarginLabelsCount
RowsCD28, CD86, LCP2, IL12RB1, TYK2, CD247, FASLG, CD3G8
ColumnsTCGA-BA-4077, TCGA-BA-5152, TCGA-BA-5153, TCGA-BA-5559, TCGA-BA-A4IG, TCGA-BA-A4II, TCGA-BB-4223, TCGA-BB-4224, TCGA-BB-4225, TCGA-BB-4227, TCGA-BB-4228, TCGA-BB-A6UM, …71
Columns

This object is 71 columns wide. A matrix carries no per-column schema, so its width is what the catalogue records and there is nothing to list one column at a time. What it holds is described whole instead, summarised over every cell: see Values and Margins above.

Structure fingerprint

2 other datasets carry the same structure fingerprint. That fingerprint is a digest of the column names and their types, and a matrix carries neither, so on one it comes down to the width and the type held: a match is another object of 71 columns holding the same type rather than one with the same columns. The datasets are not listed, because that is not a list of anything this one is related to.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-288 × 71Unchangedrds · gzip
version 3 · 2.5 KB
exact
3.222025-10-298 × 71Unchangedrds · gzip
version 3 · 2.5 KB
exact
3.212025-04-158 × 71–rds · gzip
version 3 · 2.5 KB
exact

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