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untargeted_LCMS_data

Example data set containing missing values

Bundled with MAI · exported, loads via data()

Class
matrix
Dimensions
300 × 100
Missing
9,000
Format
rda · gzip
version 3 · 161 KB
File
data/untargeted_LCMS_data.RData
Fingerprint
ebbe2337
About this object
A run with a dimA block of cells folded into columns that share their edges, with empty slots above the columns, because a name here is hung on the whole block and not on one column.

One vector with a dim attribute. Everything in it shares a type, which is the difference between a matrix and a data.frame that happens to be all numeric. R object catalogue

Values

Computed over every cell in the object, reading it as one vector.

numeric
Cells
30,000
Missing
9,000
Min.
8.0413
1st Qu.
11.5343
Median
12.1344
Mean
12.1376
3rd Qu.
12.763
Max.
16.0695
Std. dev
0.952659
Distinct
21,000
Skewness
-0.03472
Kurtosis
0.2108
Outliers
243 133 low · 110 high
Longest missing run
8
Margins

The mean of each row, and of each column, summarised. Reading every cell as one vector gives a matrix and its transpose the same answer; these do not.

MarginMin.1st Qu.MedianMean3rd Qu.Max.Std. dev
Rows11.86612.02512.10112.16812.26712.6780.1926
Columns11.99112.09612.13512.13712.1712.2920.060053

The row means vary far more than the column means, so what separates the values runs down the rows.

Columns

This object is 100 columns wide. A matrix carries no per-column schema, so its width is what the catalogue records and there is nothing to list one column at a time. What it holds is described whole instead, summarised over every cell: see Values and Margins above.

Structure fingerprint

9 other datasets carry the same structure fingerprint. That fingerprint is a digest of the column names and their types, and a matrix carries neither, so on one it comes down to the width and the type held: a match is another object of 100 columns holding the same type rather than one with the same columns. The datasets are not listed, because that is not a list of anything this one is related to.

Version history
VersionReleasedRows × ColsChangeStored asConfidence
3.232026-04-28300 × 100Unchangedrda · gzip
version 3 · 161 KB
exact
3.222025-10-29300 × 100Unchangedrda · gzip
version 3 · 161 KB
exact
3.212025-04-15300 × 100Unchangedrda · gzip
version 3 · 161 KB
exact
3.202024-10-29300 × 100Unchangedrda · gzip
version 3 · 161 KB
exact
3.192024-04-30300 × 100Unchangedrda · gzip
version 3 · 161 KB
exact
3.182023-10-24300 × 100Unchangedrda · gzip
version 3 · 161 KB
exact
3.172023-04-25300 × 100Unchangedrda · gzip
version 3 · 161 KB
exact
3.162022-11-01300 × 100Unchangedrda · gzip
version 3 · 161 KB
exact
3.152022-04-26300 × 100Unchangedrda · gzip
version 3 · 161 KB
exact
3.142021-10-26300 × 100rda · gzip
version 3 · 161 KB
exact

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