gf5_meta
Toy data for examples and testing of the `GenomicPlot` package
Bundled with GenomicPlot · exported, loads via data()
Class
list
Elements
7
Missing
0
Format
rda · bzip2
version 2 · 3.2 KB
File
data/gf5_meta.rda
Fingerprint
1a0ef35b
Source
The data is produced by running the following code: txdb <- AnnotationDbi::loadDb(system.file("extdata", "txdb.sql", package = "GenomicPlot")) gf5_meta <- GenomicPlot::prepare_5parts_genomic_features(txdb, meta = TRUE, nbins = 100, fiveP = -2000, threeP = 1000, longest = TRUE)
About this object
R's general-purpose container. Elements can be any type and any size. R object catalogue
Structure
Distinct
6
Nesting depth
2
Element length
1 – 5
Total length
15
Elements
Element
Type
Distinct
Missing
Summary
windowRslist20nested
Element length
0 – 0
Total length
0
nbins
numeric
1
0
100
scaled_binsnumeric403 – 43mean 19.8
Min.
3
1st Qu.
9
Median
22
Mean
19.8
3rd Qu.
22
Max.
43
Std. dev
15.3851
Skewness
0.3574
Kurtosis
-1.633
Outliers
10 low · 1 high
fiveP
numeric
1
0
-2000
threeP
numeric
1
0
1000
meta
logical
1
0
1 true·0 false
longest
logical
1
0
1 true·0 false
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 7 elements | Unchanged | rda · bzip2 version 2 · 3.2 KB | exact |
| 3.22 | 2025-12-08 | 7 elements | Unchanged | rda · bzip2 version 2 · 3.2 KB | exact |
| 3.21 | 2025-06-26 | 7 elements | Unchanged | rda · bzip2 version 2 · 3.2 KB | exact |
| 3.20 | 2024-10-29 | 7 elements | Unchanged | rda · bzip2 version 2 · 3.2 KB | exact |
| 3.19 | 2024-08-26 | 7 elements | Unchanged | rda · bzip2 version 2 · 3.2 KB | exact |
| 3.18 | 2024-04-08 | 7 elements | – | rda · bzip2 version 2 · 3.2 KB | exact |