Skip to content

IDOLOptimizedCpGs.compTable

IDOL Optimized CpGs matrix for adult blood DNA methylation deconvolution EPIC

Bundled with FlowSorted.Blood.EPIC · exported, loads via data()

Class
matrix
Dimensions
450 × 6
Missing
0
Format
rda · gzip
version 3 · 23 KB
File
data/IDOLOptimizedCpGs.compTable.rda
Fingerprint
61ec48b2
Format documented
Yes
Source
Source not stated
About this object
A flat block of values with dimensionsA block of cells sharing every edge, with nothing above the columns and nothing in it: a name here is hung on the whole block rather than on one column.

A single vector with a dim attribute. All elements share one type. R object catalogue

Values

Computed over every cell in the object, reading it as one vector.

numeric
Cells
2,700
Missing
0
Min.
0.0146742
1st Qu.
0.123329
Median
0.61794
Mean
0.540789
3rd Qu.
0.904989
Max.
0.985642
Std. dev
0.363604
Distinct
2,700
Skewness
-0.2304
Kurtosis
-1.652
Margins

The mean of each row, and of each column, summarised. Reading every cell as one vector gives a matrix and its transpose the same answer; these do not.

MarginMin.1st Qu.MedianMean3rd Qu.Max.Std. dev
Rows0.0629860.236310.676550.540790.784770.936350.28147
Columns0.513830.526230.534580.540790.558140.57230.023291

The row means vary far more than the column means, so what separates the values runs down the rows.

Dimensions and labels
MarginLabelsCount
Rowscg08769189, cg07661835, cg00219921, cg13468685, cg04329870, cg14085952, cg09318840, cg02133939, cg07215281, cg07879474, cg00482026, cg20538211, …450
ColumnsCD8T, CD4T, NK, Bcell, Mono, Neu6
Columns

This object is 6 columns wide. A matrix carries no per-column schema, so its width is what the catalogue records and there is nothing to list one column at a time. What it holds is described whole instead, summarised over every cell: see Values and Margins above.

Structure fingerprint

32 other datasets carry the same structure fingerprint. That fingerprint is a digest of the column names and their types, and a matrix carries neither, so on one it comes down to the width and the type held: a match is another object of 6 columns holding the same type rather than one with the same columns. The datasets are not listed, because that is not a list of anything this one is related to.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-28450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.222025-10-29450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.212025-04-15450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.202024-10-29450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.192024-04-30450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.182023-10-24450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.172023-05-18450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.162022-11-01450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.152022-04-26450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.142021-10-27450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.132021-07-08450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.122020-10-27450 × 6Unchangedrda · gzip
version 3 · 23 KB
exact
3.112020-05-10450 × 6–rda · gzip
version 3 · 23 KB
exact

Privacy choices

These apply to this browser and are stored on this device only. Nothing about your choice is sent to us.

Read the privacy policy