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SG_reclassify

Splicing graph example for Events_ReClassification function

Bundled with EventPointer · exported, loads via data()

Class
list
Elements
5
Missing
0
Format
rda · gzip
version 3 · 16 KB
File
data/SG_reclassify.rda
Fingerprint
b1209b16
Format documented
Yes
Source
Source not stated
About this object
A list with no shape constraintsRows of cells of visibly different widths, one below the next, with nothing lining them up and nothing in them, and under them a small block with a header band: an element of a list can be another structure. There is no common length, so there is no row count.list

R's general-purpose container. Elements can be any type and any size. R object catalogue

Structure
Distinct
5
Nesting depth
3
Element length
3 – 3
Total length
15
Nested rows
585
Nested columns
9
Elements
Element
Type
Distinct
Missing
Summary
ENSG00000223972
list
3
0
nested·51 rows nested·9 cols
Element length
9 – 2,040
Total length
3,649
Nesting depth
2
Nested rows
51
What is inside it
Element
Type
Distinct
Missing
Summary
Edges
list
9
0
nested
Element length
51 – 51
Total length
459
Incidence
numeric
3
0
-1 – 1·40 × 51 matrixmean 0
Min.
-1
1st Qu.
0
Median
0
Mean
0
3rd Qu.
0
Max.
1
Std. dev
0.2237
Skewness
-3.762e-16
Kurtosis
16.98
Zeros
1,938
Every nested table has these 9 columns
  • From
  • To
  • Chr
  • Start
  • End
  • Strand
  • Type
  • featureID
  • transcripts
ENSG00000162825
list
3
0
nested·229 rows nested·9 cols
Element length
9 – 48,090
Total length
92,199
Nesting depth
2
Nested rows
229
What is inside it
Element
Type
Distinct
Missing
Summary
Edges
list
9
0
nested
Element length
229 – 229
Total length
2,061
Incidence
numeric
3
0
-1 – 1·210 × 229 matrixmean 0
Min.
-1
1st Qu.
0
Median
0
Mean
0
3rd Qu.
0
Max.
1
Std. dev
0.0976
Skewness
-4.539e-16
Kurtosis
102
Zeros
47,632
Every nested table has these 9 columns
  • From
  • To
  • Chr
  • Start
  • End
  • Strand
  • Type
  • featureID
  • transcripts
ENSG00000237491
list
3
0
nested·131 rows nested·9 cols
Element length
9 – 11,790
Total length
19,899
Nesting depth
2
Nested rows
131
What is inside it
Element
Type
Distinct
Missing
Summary
Edges
list
9
0
nested
Element length
131 – 131
Total length
1,179
Incidence
numeric
3
0
-1 – 1·90 × 131 matrixmean 0
Min.
-1
1st Qu.
0
Median
0
Mean
0
3rd Qu.
0
Max.
1
Std. dev
0.1491
Skewness
2.218e-16
Kurtosis
41.99
Zeros
11,528
Every nested table has these 9 columns
  • From
  • To
  • Chr
  • Start
  • End
  • Strand
  • Type
  • featureID
  • transcripts
ENSG00000160072
list
3
0
nested·74 rows nested·9 cols
Element length
9 – 4,440
Total length
8,049
Nesting depth
2
Nested rows
74
What is inside it
Element
Type
Distinct
Missing
Summary
Edges
list
9
0
nested
Element length
74 – 74
Total length
666
Incidence
numeric
3
0
-1 – 1·60 × 74 matrixmean 0
Min.
-1
1st Qu.
0
Median
0
Mean
0
3rd Qu.
0
Max.
1
Std. dev
0.1826
Skewness
2.048e-16
Kurtosis
26.99
Zeros
4,292
Every nested table has these 9 columns
  • From
  • To
  • Chr
  • Start
  • End
  • Strand
  • Type
  • featureID
  • transcripts
ENSG00000142611
list
3
0
nested·100 rows nested·9 cols
Element length
9 – 7,800
Total length
13,893
Nesting depth
2
Nested rows
100
What is inside it
Element
Type
Distinct
Missing
Summary
Edges
list
9
0
nested
Element length
100 – 100
Total length
900
Incidence
numeric
3
0
-1 – 1·78 × 100 matrixmean 0
Min.
-1
1st Qu.
0
Median
0
Mean
0
3rd Qu.
0
Max.
1
Std. dev
0.1601
Skewness
4.008e-16
Kurtosis
35.99
Zeros
7,600
Every nested table has these 9 columns
  • From
  • To
  • Chr
  • Start
  • End
  • Strand
  • Type
  • featureID
  • transcripts
Every nested table has these 9 columns
  • From
  • To
  • Chr
  • Start
  • End
  • Strand
  • Type
  • featureID
  • transcripts
Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-285 elementsUnchangedrda · gzip
version 3 · 16 KB
exact
3.222025-10-295 elementsUnchangedrda · gzip
version 3 · 16 KB
exact
3.212025-07-155 elementsUnchangedrda · gzip
version 3 · 16 KB
exact
3.202024-10-295 elementsUnchangedrda · gzip
version 3 · 16 KB
exact
3.192024-04-305 elementsUnchangedrda · gzip
version 3 · 16 KB
exact
3.182023-10-245 elementsUnchangedrda · gzip
version 3 · 16 KB
exact
3.172023-04-255 elementsUnchangedrda · gzip
version 3 · 16 KB
exact
3.162022-12-145 elementsUnchangedrda · gzip
version 3 · 16 KB
exact
3.152022-06-095 elements–rda · gzip
version 3 · 16 KB
exact

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