Mm.c2
Mouse C2 MSigDB Gene Set Collections
Bundled with EGSEAdata · exported, loads via data()
Class
list
Elements
4,729
Missing
0
Format
rda · gzip
version 2 · 1.9 MB
File
data/Mm.c2.rdata
Fingerprint
c886f401
Format documented
Yes
Source
Downloaded from http://bioinf.wehi.edu.au/software/MSigDB/. Extracted from Aravind Subramanian, Pablo Tamayo, Vamsi K. Mootha, Sayan Mukherjee, Benjamin L. Ebert, Michael A. Gillette, Amanda Paulovich, Scott L. Pomeroy, Todd R. Golub, Eric S. Lander, and Jill P. Mesirov Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles PNAS 2005 102 (43) 15545-15550
About this object
R's general-purpose container. Elements can be any type and any size. R object catalogue
Structure
Distinct
4,727
Element length
3 – 2,922
Total length
726,058
Elements
Element
Type
Distinct
Missing
Summary
KEGG_GLYCOLYSIS_GLUCONEOGENESIS
character
81
0
5 – 9 characters
KEGG_CITRATE_CYCLE_TCA_CYCLE
character
33
0
5 – 6 characters
KEGG_PENTOSE_PHOSPHATE_PATHWAY
character
33
0
5 – 6 characters
KEGG_PENTOSE_AND_GLUCURONATE_INTERCONVERSIONS
character
32
0
5 – 6 characters
KEGG_FRUCTOSE_AND_MANNOSE_METABOLISM
character
41
0
5 – 6 characters
KEGG_GALACTOSE_METABOLISM
character
39
0
5 – 6 characters
KEGG_ASCORBATE_AND_ALDARATE_METABOLISM
character
30
0
5 – 6 characters
KEGG_FATTY_ACID_METABOLISM
character
56
0
5 – 9 characters
KEGG_STEROID_BIOSYNTHESIS
character
21
0
5 – 6 characters
KEGG_PRIMARY_BILE_ACID_BIOSYNTHESIS
character
26
0
5 – 6 characters
KEGG_STEROID_HORMONE_BIOSYNTHESIS
character
88
0
5 – 9 characters
KEGG_OXIDATIVE_PHOSPHORYLATION
character
155
0
5 – 9 characters
KEGG_PURINE_METABOLISM
character
171
0
5 – 9 characters
KEGG_PYRIMIDINE_METABOLISM
character
106
0
5 – 9 characters
KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM
character
35
0
5 – 9 characters
KEGG_GLYCINE_SERINE_AND_THREONINE_METABOLISM
character
34
0
5 – 6 characters
KEGG_CYSTEINE_AND_METHIONINE_METABOLISM
character
39
0
5 – 9 characters
KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION
character
60
0
5 – 9 characters
KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_BIOSYNTHESIS
character
11
0
5 – 6 characters
KEGG_LYSINE_DEGRADATION
character
50
0
5 – 6 characters
KEGG_ARGININE_AND_PROLINE_METABOLISM
character
66
0
5 – 9 characters
KEGG_HISTIDINE_METABOLISM
character
36
0
5 – 6 characters
KEGG_TYROSINE_METABOLISM
character
53
0
5 – 9 characters
KEGG_PHENYLALANINE_METABOLISM
character
27
0
5 – 9 characters
KEGG_TRYPTOPHAN_METABOLISM
character
53
0
5 – 9 characters
KEGG_BETA_ALANINE_METABOLISM
character
30
0
5 – 6 characters
KEGG_TAURINE_AND_HYPOTAURINE_METABOLISM
character
12
0
5 – 6 characters
KEGG_SELENOAMINO_ACID_METABOLISM
character
28
0
5 – 6 characters
KEGG_GLUTATHIONE_METABOLISM
character
58
0
5 – 9 characters
KEGG_STARCH_AND_SUCROSE_METABOLISM
character
58
0
5 – 9 characters
KEGG_N_GLYCAN_BIOSYNTHESIS
character
50
0
5 – 6 characters
KEGG_OTHER_GLYCAN_DEGRADATION
character
17
0
5 – 6 characters
KEGG_O_GLYCAN_BIOSYNTHESIS
character
33
0
5 – 9 characters
KEGG_AMINO_SUGAR_AND_NUCLEOTIDE_SUGAR_METABOLISM
character
54
0
5 – 6 characters
KEGG_GLYCOSAMINOGLYCAN_DEGRADATION
character
28
0
5 – 6 characters
KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_CHONDROITIN_SULFATE
character
24
0
5 – 9 characters
KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_KERATAN_SULFATE
character
15
0
5 – 6 characters
KEGG_GLYCOSAMINOGLYCAN_BIOSYNTHESIS_HEPARAN_SULFATE
character
28
0
5 – 6 characters
KEGG_GLYCEROLIPID_METABOLISM
character
70
0
5 – 9 characters
KEGG_INOSITOL_PHOSPHATE_METABOLISM
character
55
0
5 – 6 characters
KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS
character
25
0
5 – 6 characters
KEGG_GLYCEROPHOSPHOLIPID_METABOLISM
character
81
0
5 – 9 characters
KEGG_ETHER_LIPID_METABOLISM
character
37
0
5 – 9 characters
KEGG_ARACHIDONIC_ACID_METABOLISM
character
108
0
5 – 9 characters
KEGG_LINOLEIC_ACID_METABOLISM
character
62
0
5 – 9 characters
KEGG_ALPHA_LINOLENIC_ACID_METABOLISM
character
21
0
5 – 9 characters
KEGG_SPHINGOLIPID_METABOLISM
character
46
0
5 – 6 characters
KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_LACTO_AND_NEOLACTO_SERIES
character
26
0
5 – 9 characters
KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GLOBO_SERIES
character
15
0
5 – 6 characters
KEGG_GLYCOSPHINGOLIPID_BIOSYNTHESIS_GANGLIO_SERIES
character
16
0
5 – 6 characters
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.22 | 2025-10-29 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.21 | 2025-04-15 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.20 | 2024-10-29 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.19 | 2024-04-30 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.18 | 2023-10-24 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.17 | 2023-04-25 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.16 | 2022-11-01 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.15 | 2022-04-26 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.14 | 2021-10-26 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.13 | 2021-05-19 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.12 | 2020-10-27 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.11 | 2020-04-27 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.10 | 2019-10-29 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.9 | 2019-05-02 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.8 | 2018-10-30 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.7 | 2018-04-30 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.6 | 2017-10-30 | 4,729 elements | Unchanged | rda · gzip version 2 · 1.9 MB | exact |
| 3.5 | 2017-08-16 | 4,729 elements | – | rda · gzip version 2 · 1.9 MB | exact |