exampleExp

Example data sets for `ChIPQC` package, each containing a `ChIPQCexperiment` object, as well as a pre-compiled blacklist for hg19.

Bundled with ChIPQC · exported, loads via data()

Class

ChIPQCexperiment

Elements

Missing

Format

rda · xz

version 3 · 92 KB

File

data/example_QCexperiment.RData

Fingerprint

0efd4e63

Format documented

Yes

Source

Ross-Innes, C. S., Stark, R., Teschendorff, A. E., Holmes, K. A., Ali, H. R., Dunning, M. J., Brown, G. D., Gojis, O., Ellis, I. O., Green, A. R., Ali, S., Chin, S.-F., Palmieri, C., Caldas, C., and Carroll, J. S. (2012). Differential oestrogen receptor binding is associated with clinical outcome in breast cancer. Nature 481, 389-393.

Declared attributes

Other attributes

Read by name, kind and length, with the value where it is short enough to show. No rule here knows what any of them means.

Attribute	Holds	Length
DBA	DBA	12
Samples	list	6
annotation	list	1

The same data in 9 other packages

This data is identical to the data these packages carry, down to the byte. Where they call it something else, the other name is shown.

TCseqtca_ATAC genAriseSimon genAriseWT.dataset FLCorebt4CRAN FLCoreple4CRAN FLCoreple4.biolCRAN FLCoreple4.indexCRAN FLCoreple4.srCRAN FLCoreple4sexCRAN Haplingen.cols.1CRAN RCRCpicarrCRAN matchrNoneCRAN metalitedefault_observationCRAN symDMatrixblockCRAN teemsgen_infoCRAN

The same data in this package under 1 other name

This package carries the same data under more than one name, identical down to the byte.

ChIPQCtamoxifen

Version history

Version	Released	Size	Change	Stored as	Confidence
3.23	2026-05-08	0 elements	Unchanged	rda · xz version 3 · 92 KB	exact
3.22	2025-10-29	0 elements	Unchanged	rda · xz version 3 · 92 KB	exact
3.21	2025-04-15	0 elements	Unchanged	rda · xz version 3 · 92 KB	exact
3.20	2024-10-29	0 elements	Unchanged	rda · xz version 3 · 92 KB	exact
3.19	2024-04-30	0 elements	Unchanged	rda · xz version 3 · 92 KB	exact
3.18	2023-10-24	0 elements	Unchanged	rda · xz version 3 · 92 KB	exact
3.17	2023-08-25	0 elements	Unchanged	rda · xz version 3 · 92 KB	exact
3.16	2023-01-10	0 elements	Unchanged	rda · xz version 3 · 92 KB	exact
3.15	2022-08-08	0 elements	Repackaged	rda · xz version 3 · 92 KB	exact
3.14	2021-10-26	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.13	2021-05-19	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.12	2020-10-27	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.11	2020-07-18	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.10	2019-10-29	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.9	2019-05-02	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.8	2019-02-28	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.7	2018-09-21	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.6	2017-10-30	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.5	2017-08-08	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.4	2017-04-03	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.3	2016-09-27	0 elements	Unchanged	rda · xz version 2 · 93 KB	exact
3.2	2015-10-15	0 elements	Unchanged	rda · xz version 2 · 78 KB	exact
3.1	2015-07-07	0 elements	Unchanged	rda · xz version 2 · 78 KB	exact
3.0	2014-11-07	0 elements	Unchanged	rda · xz version 2 · 78 KB	exact
2.14	2014-07-27	0 elements	–	rda · xz version 2 · 78 KB	exact