A0SD.BAF
B-allele frequencies of selected chromosomes for TCGA sample A1-A0SD.
Bundled with CHAT · exported, loads via data()
Class
data.frame
Dimensions
135,785 × 6
Missing
531
Format
rda · xz
version 2 · 2.4 MB
File
data/A0SD.BAF.rda
Fingerprint
597cf612
Source
Source not stated
About this object
Equal-length columns presented as a table, R's standard rectangular format. R object catalogue
Columns
Column
Type
Distinct
Missing
Summary
factor135,7850SNP_A-17802891SNP_A-17803001SNP_A-17803311SNP_A-17803641SNP_A-17803781SNP_A-17804231+135,779 more
SNP_A-17802891SNP_A-17803001SNP_A-17803311SNP_A-17803641SNP_A-17803781SNP_A-17804231+135,779 more
Levels
135,785
Used
135,785
Rows per level, the 50 commonest of 135,785
SNP_A-17802891SNP_A-17803001SNP_A-17803311SNP_A-17803641SNP_A-17803781SNP_A-17804231SNP_A-17804401SNP_A-17804441SNP_A-17804521SNP_A-17804791SNP_A-17804841SNP_A-17804961SNP_A-17805151SNP_A-17805271SNP_A-17805401SNP_A-17805881SNP_A-17806511SNP_A-17807151SNP_A-17807271SNP_A-17807411SNP_A-17807581SNP_A-17807661SNP_A-17807691SNP_A-17808011SNP_A-17808041SNP_A-17808071SNP_A-17808801SNP_A-17809161SNP_A-17809281SNP_A-17809291SNP_A-17809431SNP_A-17809471SNP_A-17809641SNP_A-17809691SNP_A-17809731SNP_A-17810021SNP_A-17810391SNP_A-17810431SNP_A-17810641SNP_A-17810691SNP_A-17810781SNP_A-17811121SNP_A-17811231SNP_A-17811321SNP_A-17811451SNP_A-17811751SNP_A-17811841SNP_A-17812611SNP_A-17812701SNP_A-17812791
integer308 – 10mean 8.996
Min.
8
1st Qu.
8
Median
9
Mean
8.9962
3rd Qu.
10
Max.
10
Std. dev
0.8371
Skewness
0.0072
Kurtosis
-1.573
Order
ascending
integer135,7470125644 – 146264206mean 6.772e+7
Min.
125644
1st Qu.
23326460
Median
72206547
Mean
6.77183e+7
3rd Qu.
108522616
Max.
146264206
Std. dev
4.45582e+7
Skewness
-0.0047
Kurtosis
-1.415
integer135,7470125668 – 146264230mean 6.772e+7
Min.
125668
1st Qu.
23326484
Median
72206571
Mean
6.77184e+7
3rd Qu.
108522640
Max.
146264230
Std. dev
4.45582e+7
Skewness
-0.0047
Kurtosis
-1.415
numeric127,323266-570.5 – 1991mean 0.5083
Min.
-570.5
1st Qu.
0.0047
Median
0.499
Mean
0.5083
3rd Qu.
0.9967
Max.
1991
Std. dev
6.0273
Skewness
260
Kurtosis
8.85e+4
Zeros
178
Outliers
1,259638 low · 621 high
Longest gap
2
numeric121,938265-1461 – 1563mean 0.5014
Min.
-1461
1st Qu.
0.006
Median
0.5032
Mean
0.5014
3rd Qu.
0.9967
Max.
1563
Std. dev
6.5638
Skewness
16.62
Kurtosis
4.326e+4
Zeros
168
Outliers
431210 low · 221 high
Longest gap
2
Same structure in 1 other dataset
These datasets share the same columns and types but hold different data.
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 1.1 | 2014-02-10 | 135,785 × 6 | Unchanged | rda · xz version 2 · 2.4 MB | exact |
| 1.0 | 2014-02-10 | 135,785 × 6 | – | rda · xz version 2 · 2.4 MB | exact |