AAindex

AAindex Data of 544 Physicochemical and Biological Properties for 20 Amino Acids

Bundled with BioMedR · exported, loads via data()

Class

data.frame

Dimensions

544 × 26

Missing

Format

rda · gzip

version 2 · 52 KB

File

data/AAindex.rda

Fingerprint

84bebee5

Source

Source not stated

About this object

Equal-length columns presented as a table, R's standard rectangular format. R object catalogue

Columns

Column

Type

Distinct

Missing

Summary

AccNo

character

544

10 characters

PropDesc

character

543

19 – 154 characters

LITDBNo

character

143

11 – 26 characters

Author

character

149

9 – 104 characters

ArtTitle

character

149

13 – 194 characters

JournalRef

character

195

20 – 327 characters

numeric

374

-12.04 – 685mean 7.792

Min.

-12.04

1st Qu.

0.085

Median

0.86

Mean

7.7922

3rd Qu.

1.8

Max.

685

Std. dev

37.7149

Skewness

12.4

Kurtosis

198.9

Zeros

Outliers

12313 low · 110 high

numeric

373

-184 – 382mean 7.93

Min.

-184

1st Qu.

0.0795

Median

0.93

Mean

7.9298

3rd Qu.

1.915

Max.

382

Std. dev

41.8426

Skewness

4.385

Kurtosis

29.23

Zeros

Outliers

11229 low · 83 high

numeric

388

-97 – 397mean 5.992

Min.

-97

1st Qu.

0.0822

Median

0.824

Mean

5.9919

3rd Qu.

2.02

Max.

397

Std. dev

33.1282

Skewness

5.498

Kurtosis

47.78

Zeros

Outliers

10733 low · 74 high

numeric

397

-97 – 400mean 7.232

Min.

-97

1st Qu.

0.1088

Median

0.91

Mean

7.2319

3rd Qu.

2.12

Max.

400

Std. dev

33.7781

Skewness

Kurtosis

50.38

Zeros

Outliers

11224 low · 88 high

numeric

353

-16.5 – 329mean 9.371

Min.

-16.5

1st Qu.

0.17

Median

0.815

Mean

9.3708

3rd Qu.

1.6

Max.

329

Std. dev

34.9669

Skewness

5.009

Kurtosis

28.18

Zeros

Outliers

10618 low · 88 high

numeric

404

-139 – 427mean 6.935

Min.

-139

1st Qu.

0.07

Median

0.875

Mean

6.9349

3rd Qu.

2.2075

Max.

427

Std. dev

36.3621

Skewness

5.12

Kurtosis

44.63

Zeros

Outliers

12031 low · 89 high

numeric

374

-139 – 313mean 6.103

Min.

-139

1st Qu.

0.0478

Median

0.935

Mean

6.1029

3rd Qu.

1.68

Max.

313

Std. dev

33.7501

Skewness

3.889

Kurtosis

26.94

Zeros

Outliers

10624 low · 82 high

numeric

360

-66 – 707mean 5.778

Min.

-66

1st Qu.

Median

0.63

Mean

5.7784

3rd Qu.

1.72

Max.

707

Std. dev

37.446

Skewness

13.98

Kurtosis

237.5

Zeros

Outliers

12124 low · 97 high

numeric

369

-73 – 277mean 7.357

Min.

-73

1st Qu.

0.1075

Median

0.92

Mean

7.3575

3rd Qu.

1.77

Max.

277

Std. dev

32.4038

Skewness

4.833

Kurtosis

26.98

Zeros

Outliers

9925 low · 74 high

numeric

392

-18.32 – 394mean 10.66

Min.

-18.32

1st Qu.

0.2945

Median

0.988

Mean

10.6591

3rd Qu.

3.345

Max.

394

Std. dev

37.2576

Skewness

5.25

Kurtosis

33.91

Zeros

Outliers

9012 low · 78 high

numeric

381

-17.79 – 581mean 11.01

Min.

-17.79

1st Qu.

0.335

Median

1.02

Mean

11.0104

3rd Qu.

3.425

Max.

581

Std. dev

41.5892

Skewness

7.309

Kurtosis

75.32

Zeros

Outliers

10712 low · 95 high

numeric

388

-205 – 575mean 7.61

Min.

-205

1st Qu.

0.06

Median

0.9485

Mean

7.6098

3rd Qu.

1.9

Max.

575

Std. dev

43.6992

Skewness

5.584

Kurtosis

61.74

Zeros

Outliers

13235 low · 97 high

numeric

385

-15.704 – 283mean 9.507

Min.

-15.704

1st Qu.

0.2522

Median

0.98

Mean

9.5065

3rd Qu.

2.1875

Max.

283

Std. dev

33.1429

Skewness

4.549

Kurtosis

22.3

Zeros

Outliers

9819 low · 79 high

numeric

380

-34.5 – 303mean 11.27

Min.

-34.5

1st Qu.

0.3546

Median

1.055

Mean

11.2717

3rd Qu.

2.8

Max.

303

Std. dev

39.4251

Skewness

4.441

Kurtosis

20.53

Zeros

Outliers

9614 low · 82 high

numeric

381

-132 – 366mean 5.434

Min.

-132

1st Qu.

0.03

Median

0.71

Mean

5.4339

3rd Qu.

2.27

Max.

366

Std. dev

31.1508

Skewness

5.182

Kurtosis

48.14

Zeros

Outliers

9421 low · 73 high

Longest gap

numeric

379

-70 – 593mean 6.254

Min.

-70

1st Qu.

0.059

Median

0.805

Mean

6.2539

3rd Qu.

1.5675

Max.

593

Std. dev

34.7418

Skewness

10.56

Kurtosis

155.6

Zeros

Outliers

13330 low · 103 high

numeric

365

-54 – 490mean 7.777

Min.

-54

1st Qu.

0.09

Median

0.83

Mean

7.7766

3rd Qu.

1.7305

Max.

490

Std. dev

34.147

Skewness

7.829

Kurtosis

84.32

Zeros

Outliers

12520 low · 105 high

numeric

374

-33.7 – 282mean 11.44

Min.

-33.7

1st Qu.

0.2575

Median

0.9855

Mean

11.438

3rd Qu.

2.1

Max.

282

Std. dev

41.3008

Skewness

4.452

Kurtosis

20.03

Zeros

Outliers

10518 low · 87 high

numeric

382

-20.232 – 344mean 9.788

Min.

-20.232

1st Qu.

0.3154

Median

Mean

9.7881

3rd Qu.

2.75

Max.

344

Std. dev

38.2393

Skewness

5.421

Kurtosis

31.28

Zeros

Outliers

8212 low · 70 high

numeric

380

-16.22 – 553mean 10.28

Min.

-16.22

1st Qu.

0.2932

Median

0.918

Mean

10.2767

3rd Qu.

3.18

Max.

553

Std. dev

38.9799

Skewness

7.323

Kurtosis

77.44

Zeros

Outliers

8510 low · 75 high

The same data in 2 other packages

This data is identical to the data these packages carry, down to the byte.

protr RcpiBioconductor

The structure fingerprint found nothing beyond this list.

Version history

Version	Released	Size	Change	Stored as	Confidence
1.2.1	2019-07-05	544 × 26	Unchanged	rda · gzip version 2 · 52 KB	exact
1.1.2	2019-04-04	544 × 26	Unchanged	rda · gzip version 2 · 52 KB	exact
1.1.1	2019-01-15	544 × 26	–	rda · gzip version 2 · 52 KB	exact