AAInfo

Information Indices Descriptors for 20 Amino Acids calculated by Dragon

Bundled with BioMedR · exported, loads via data()

Class

data.frame

Dimensions

20 × 47

Missing

Format

rda · gzip

version 2 · 3.1 KB

File

data/AAInfo.rda

Fingerprint

764a341c

Source

Source not stated

About this object

Equal-length columns presented as a table, R's standard rectangular format. R object catalogue

Declared attributes

Row names

Yes

Columns

Column

Type

Distinct

Missing

Summary

ISIZ

numeric

33.219 – 128.382mean 82.6

Min.

33.219

1st Qu.

68.1153

Median

83.575

Mean

82.603

3rd Qu.

99.5915

Max.

128.382

Std. dev

25.5154

Skewness

-0.0246

Kurtosis

-0.9521

IAC

numeric

17.61 – 43.399mean 31.75

Min.

17.61

1st Qu.

27.9892

Median

32.492

Mean

31.7476

3rd Qu.

35.5055

Max.

43.399

Std. dev

6.6149

Skewness

-0.1359

Kurtosis

-0.5218

AAC

numeric

1.477 – 1.921mean 1.668

Min.

1.477

1st Qu.

1.5908

Median

1.669

Mean

1.6682

3rd Qu.

1.7475

Max.

1.921

Std. dev

0.118

Skewness

0.0738

Kurtosis

-0.8268

IDE

numeric

1.522 – 2.91mean 2.27

Min.

1.522

1st Qu.

1.939

Median

2.261

Mean

2.27

3rd Qu.

2.5448

Max.

2.91

Std. dev

0.4076

Skewness

-0.2058

Kurtosis

-1.156

IDM

numeric

3.197 – 6.504mean 5.005

Min.

3.197

1st Qu.

4.6647

Median

4.997

Mean

5.0046

3rd Qu.

5.363

Max.

6.504

Std. dev

0.7779

Skewness

-0.2957

Kurtosis

-0.1494

Outliers

21 low · 1 high

IDDE

numeric

0.918 – 3.323mean 2.507

Min.

0.918

1st Qu.

2.4068

Median

2.722

Mean

2.5073

3rd Qu.

2.737

Max.

3.323

Std. dev

0.5542

Skewness

-1.208

Kurtosis

1.137

Outliers

43 low · 1 high

IDDM

numeric

2.291 – 3.88mean 3.15

Min.

2.291

1st Qu.

2.972

Median

3.142

Mean

3.1504

3rd Qu.

3.3295

Max.

3.88

Std. dev

0.3803

Skewness

-0.242

Kurtosis

-0.2898

Outliers

21 low · 1 high

IDET

numeric

15.219 – 294.177mean 102.6

Min.

15.219

1st Qu.

54.288

Median

81.388

Mean

102.642

3rd Qu.

124.152

Max.

294.177

Std. dev

71.0598

Skewness

1.065

Kurtosis

0.455

Outliers

10 low · 1 high

IDMT

numeric

57.549 – 2400.1mean 683.5

Min.

57.549

1st Qu.

299.719

Median

479.679

Mean

683.528

3rd Qu.

795.502

Max.

2400.1

Std. dev

589.944

Skewness

1.368

Kurtosis

1.264

Outliers

20 low · 2 high

IVDE

numeric

0.918 – 1.577mean 1.378

Min.

0.918

1st Qu.

1.352

Median

1.432

Mean

1.3781

3rd Qu.

1.51

Max.

1.577

Std. dev

0.2031

Skewness

-1.3

Kurtosis

0.3702

Outliers

33 low · 0 high

IVDM

numeric

2.156 – 3.82mean 3.022

Min.

2.156

1st Qu.

2.788

Median

2.983

Mean

3.0215

3rd Qu.

3.2367

Max.

3.82

Std. dev

0.407

Skewness

-0.1178

Kurtosis

-0.4537

HVcpx

numeric

1.732 – 2.783mean 2.285

Min.

1.732

1st Qu.

1.996

Median

2.259

Mean

2.2847

3rd Qu.

2.5025

Max.

2.783

Std. dev

0.3239

Skewness

-0.0709

Kurtosis

-1.304

HDcpx

numeric

1.067 – 1.531mean 1.344

Min.

1.067

1st Qu.

1.3057

Median

1.349

Mean

1.3438

3rd Qu.

1.3942

Max.

1.531

Std. dev

0.1066

Skewness

-0.6676

Kurtosis

0.3899

Outliers

21 low · 1 high

Uindex

numeric

8.364 – 37.432mean 20.91

Min.

8.364

1st Qu.

17.2952

Median

22.4

Mean

20.9094

3rd Qu.

23.9183

Max.

37.432

Std. dev

6.7221

Skewness

0.195

Kurtosis

0.0137

Outliers

10 low · 1 high

Vindex

numeric

0.347 – 1.106mean 0.766

Min.

0.347

1st Qu.

0.6225

Median

0.795

Mean

0.766

3rd Qu.

0.964

Max.

1.106

Std. dev

0.2217

Skewness

-0.311

Kurtosis

-1.08

Xindex

numeric

0.517 – 1.34mean 1.066

Min.

0.517

1st Qu.

0.949

Median

1.151

Mean

1.0661

3rd Qu.

1.271

Max.

1.34

Std. dev

0.2547

Skewness

-0.8285

Kurtosis

-0.7816

Yindex

numeric

1.025 – 3.971mean 2.415

Min.

1.025

1st Qu.

1.822

Median

2.351

Mean

2.4152

3rd Qu.

3.253

Max.

3.971

Std. dev

0.8818

Skewness

0.1478

Kurtosis

-1.179

IC0

numeric

1.477 – 1.921mean 1.668

Min.

1.477

1st Qu.

1.5908

Median

1.669

Mean

1.6682

3rd Qu.

1.7475

Max.

1.921

Std. dev

0.118

Skewness

0.0738

Kurtosis

-0.8268

TIC0

numeric

17.61 – 43.399mean 31.75

Min.

17.61

1st Qu.

27.9892

Median

32.492

Mean

31.7476

3rd Qu.

35.5055

Max.

43.399

Std. dev

6.6149

Skewness

-0.1359

Kurtosis

-0.5218

SIC0

numeric

0.331 – 0.53mean 0.3995

Min.

0.331

1st Qu.

0.3492

Median

0.4025

Mean

0.3995

3rd Qu.

0.4422

Max.

0.53

Std. dev

0.058

Skewness

0.5817

Kurtosis

-0.6473

CIC0

numeric

1.561 – 3.151mean 2.553

Min.

1.561

1st Qu.

2.267

Median

2.5595

Mean

2.5534

3rd Qu.

2.9822

Max.

3.151

Std. dev

0.4413

Skewness

-0.4826

Kurtosis

-0.7917

BIC0

numeric

0.315 – 0.53mean 0.3935

Min.

0.315

1st Qu.

0.3372

Median

0.394

Mean

0.3935

3rd Qu.

0.4332

Max.

0.53

Std. dev

0.0606

Skewness

0.6007

Kurtosis

-0.5902

IC1

numeric

2.768 – 3.746mean 3.121

Min.

2.768

1st Qu.

2.895

Median

3.14

Mean

3.1206

3rd Qu.

3.2252

Max.

3.746

Std. dev

0.2879

Skewness

0.5421

Kurtosis

-0.5555

Outliers

10 low · 1 high

TIC1

numeric

29.219 – 99.263mean 60.22

Min.

29.219

1st Qu.

48.8925

Median

59.77

Mean

60.2157

3rd Qu.

68.5833

Max.

99.263

Std. dev

16.7567

Skewness

0.4132

Kurtosis

-0.2942

Outliers

10 low · 1 high

SIC1

numeric

0.607 – 0.88mean 0.7436

Min.

0.607

1st Qu.

0.686

Median

0.7535

Mean

0.7436

3rd Qu.

0.789

Max.

0.88

Std. dev

0.0838

Skewness

0.0085

Kurtosis

-1.131

CIC1

numeric

0.4 – 1.804mean 1.101

Min.

0.4

1st Qu.

0.8432

Median

1.0975

Mean

1.1007

3rd Qu.

1.3458

Max.

1.804

Std. dev

0.4115

Skewness

0.0048

Kurtosis

-1.13

BIC1

numeric

0.607 – 0.88mean 0.7316

Min.

0.607

1st Qu.

0.6742

Median

0.7225

Mean

0.7316

3rd Qu.

0.7792

Max.

0.88

Std. dev

0.0815

Skewness

0.2453

Kurtosis

-1.068

IC2

numeric

2.922 – 4.236mean 3.608

Min.

2.922

1st Qu.

3.4947

Median

3.562

Mean

3.6082

3rd Qu.

3.7967

Max.

4.236

Std. dev

0.3107

Skewness

-0.0479

Kurtosis

-0.1933

Outliers

11 low · 0 high

TIC2

numeric

29.219 – 114.382mean 70.17

Min.

29.219

1st Qu.

58.1153

Median

72.1975

Mean

70.1695

3rd Qu.

81.8675

Max.

114.382

Std. dev

20.4839

Skewness

0.083

Kurtosis

-0.4629

SIC2

numeric

0.758 – 0.954mean 0.8568

Min.

0.758

1st Qu.

0.8152

Median

0.858

Mean

0.8568

3rd Qu.

0.904

Max.

0.954

Std. dev

0.0573

Skewness

-0.1783

Kurtosis

-1.218

CIC2

numeric

0.2 – 1.063mean 0.6133

Min.

0.2

1st Qu.

0.3992

Median

0.563

Mean

0.6133

3rd Qu.

0.8562

Max.

1.063

Std. dev

0.2712

Skewness

0.2553

Kurtosis

-1.369

BIC2

numeric

0.747 – 0.925mean 0.8431

Min.

0.747

1st Qu.

0.8002

Median

0.838

Mean

0.8431

3rd Qu.

0.8938

Max.

0.925

Std. dev

0.0562

Skewness

-0.1289

Kurtosis

-1.364

IC3

numeric

2.922 – 4.533mean 3.736

Min.

2.922

1st Qu.

3.522

Median

3.7595

Mean

3.7364

3rd Qu.

3.9435

Max.

4.533

Std. dev

0.369

Skewness

-0.2059

Kurtosis

-0.0976

TIC3

numeric

29.219 – 122.382mean 73.03

Min.

29.219

1st Qu.

60.4008

Median

74.1975

Mean

73.0255

3rd Qu.

85.7703

Max.

122.382

Std. dev

22.8237

Skewness

0.1613

Kurtosis

-0.5713

SIC3

numeric

0.758 – 0.954mean 0.8856

Min.

0.758

1st Qu.

0.8615

Median

0.896

Mean

0.8856

3rd Qu.

0.914

Max.

0.954

Std. dev

0.0491

Skewness

-1.051

Kurtosis

0.7564

Outliers

22 low · 0 high

CIC3

numeric

0.2 – 1.027mean 0.4852

Min.

0.2

1st Qu.

0.353

Median

0.4105

Mean

0.4852

3rd Qu.

0.557

Max.

1.027

Std. dev

0.221

Skewness

1.057

Kurtosis

0.4222

Outliers

20 low · 2 high

BIC3

numeric

0.758 – 0.925mean 0.8712

Min.

0.758

1st Qu.

0.8575

Median

0.886

Mean

0.8712

3rd Qu.

0.896

Max.

0.925

Std. dev

0.0438

Skewness

-1.153

Kurtosis

0.5458

Outliers

22 low · 0 high

IC4

numeric

2.5 – 4.607mean 3.694

Min.

2.5

1st Qu.

3.4598

Median

3.767

Mean

3.6944

3rd Qu.

4.0035

Max.

4.607

Std. dev

0.4822

Skewness

-0.6964

Kurtosis

0.2467

Outliers

11 low · 0 high

TIC4

numeric

25 – 124.382mean 72.63

Min.

1st Qu.

59.6587

Median

75.1975

Mean

72.63

3rd Qu.

86.459

Max.

124.382

Std. dev

24.1817

Skewness

0.0714

Kurtosis

-0.539

SIC4

numeric

0.726 – 0.969mean 0.8733

Min.

0.726

1st Qu.

0.8598

Median

0.891

Mean

0.8733

3rd Qu.

0.914

Max.

0.969

Std. dev

0.0667

Skewness

-0.8166

Kurtosis

-0.4017

Outliers

33 low · 0 high

CIC4

numeric

0.148 – 1.162mean 0.5272

Min.

0.148

1st Qu.

0.353

Median

0.5

Mean

0.5272

3rd Qu.

0.6335

Max.

1.162

Std. dev

0.2627

Skewness

0.7659

Kurtosis

-0.2077

Outliers

10 low · 1 high

BIC4

numeric

0.726 – 0.917mean 0.8586

Min.

0.726

1st Qu.

0.8428

Median

0.8835

Mean

0.8586

3rd Qu.

0.896

Max.

0.917

Std. dev

0.0569

Skewness

-1.062

Kurtosis

-0.273

Outliers

22 low · 0 high

IC5

numeric

0.918 – 4.607mean 3.359

Min.

0.918

1st Qu.

2.9478

Median

3.664

Mean

3.3587

3rd Qu.

4.0035

Max.

4.607

Std. dev

0.9246

Skewness

-1.187

Kurtosis

0.6565

Outliers

11 low · 0 high

TIC5

numeric

9.183 – 124.382mean 67.75

Min.

9.183

1st Qu.

49.9967

Median

72.1585

Mean

67.751

3rd Qu.

84.8397

Max.

124.382

Std. dev

29.0258

Skewness

-0.1628

Kurtosis

-0.6438

SIC5

numeric

0.276 – 0.969mean 0.7845

Min.

0.276

1st Qu.

0.725

Median

0.8555

Mean

0.7845

3rd Qu.

0.891

Max.

0.969

Std. dev

0.1827

Skewness

-1.483

Kurtosis

1.287

Outliers

22 low · 0 high

CIC5

numeric

0.148 – 2.404mean 0.8627

Min.

0.148

1st Qu.

0.4908

Median

0.6105

Mean

0.8627

3rd Qu.

1.082

Max.

2.404

Std. dev

0.6372

Skewness

1.18

Kurtosis

0.2823

Outliers

20 low · 2 high

BIC5

numeric

0.276 – 0.906mean 0.7701

Min.

0.276

1st Qu.

0.725

Median

0.8425

Mean

0.7701

3rd Qu.

0.8752

Max.

0.906

Std. dev

0.1725

Skewness

-1.636

Kurtosis

1.682

Outliers

22 low · 0 high

The same data in 2 other packages

This data is identical to the data these packages carry, down to the byte.

protr RcpiBioconductor

The structure fingerprint found nothing beyond this list.

Version history

Version	Released	Size	Change	Stored as	Confidence
1.2.1	2019-07-05	20 × 47	Unchanged	rda · gzip version 2 · 3.1 KB	exact
1.1.2	2019-04-04	20 × 47	Unchanged	rda · gzip version 2 · 3.1 KB	exact
1.1.1	2019-01-15	20 × 47	–	rda · gzip version 2 · 3.1 KB	exact