LAL14_1_PreSaved_ResultsObj_GenBank
`Assessment` Objects for *Sulfolobus islandicus* strain LAL14/1
Bundled with AssessORFData · exported, loads via data()
Class
Assessment
Assessment/Results
Elements
11
Missing
0
Format
rda · xz
version 2 · 11 KB
File
data/LAL14_1_PreSaved_ResultsObj_GenBank.rda
Fingerprint
28a0ff96
Format documented
Yes
Source
Proteomcis data: http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD003074 NCBI's Genome Browser: https://www.ncbi.nlm.nih.gov/genome/browse/#!/prokaryotes/ GenBank record: https://www.ncbi.nlm.nih.gov/nuccore/CP003928.1
Structure
Distinct
11
Element length
1 – 2,601
Total length
10,433
Elements
Element
Type
Distinct
Missing
Summary
StrainID
character
1
0
7 characters
Species
character
1
0
13 characters
GenomeLength
integer
1
0
2465177
GeneLeftPosinteger2,6010486 – 2463931mean 1.232e+6
Min.
486
1st Qu.
646293
Median
1239741
Mean
1.23239e+6
3rd Qu.
1815115
Max.
2463931
Std. dev
706142
Skewness
-0.0263
Kurtosis
-1.144
Order
ascending
GeneRightPosinteger2,6010767 – 2465169mean 1.233e+6
Min.
767
1st Qu.
646487
Median
1241390
Mean
1.23321e+6
3rd Qu.
1817247
Max.
2465169
Std. dev
706167
Skewness
-0.0263
Kurtosis
-1.144
Order
ascending
GeneStrand
character
2
0
1 characters
GeneSource
character
1
0
7 characters
NumGenes
integer
1
0
2601
N_CS-_PE+_ORFsnumeric1200 – 1338569·2 × 6 matrixmean 2.542e+5
Min.
0
1st Qu.
2.75
Median
75
Mean
254180
3rd Qu.
186394
Max.
1338569
Std. dev
511438
Skewness
1.506
Kurtosis
0.4079
Zeros
1
Outliers
20 low · 2 high
N_CS<_PE+_ORFsnumeric1200 – 1802710·2 × 6 matrixmean 4.78e+5
Min.
0
1st Qu.
3.75
Median
84
Mean
478038
3rd Qu.
1.06539e+6
Max.
1802710
Std. dev
740055
Skewness
0.8587
Kurtosis
-1.109
Zeros
1
CategoryAssignments
character
12
0
9 characters
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.22 | 2025-10-29 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.21 | 2025-04-15 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.20 | 2024-10-29 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.19 | 2024-04-30 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.18 | 2023-10-24 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.17 | 2023-04-25 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.16 | 2022-11-01 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.15 | 2022-04-26 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.14 | 2021-10-26 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.13 | 2021-05-19 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.12 | 2020-10-27 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.11 | 2020-04-27 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.10 | 2019-10-29 | 11 elements | Unchanged | rda · xz version 2 · 11 KB | exact |
| 3.9 | 2019-05-02 | 11 elements | – | rda · xz version 2 · 11 KB | exact |