Houston_1_PreSaved_ResultsObj_Prodigal
`Assessment` Objects for *Bartonella henselae* strain Houston-1
Bundled with AssessORFData · exported, loads via data()
Class
Assessment
Assessment/Results
Elements
11
Missing
0
Format
rda · xz
version 2 · 7.3 KB
File
data/Houston_1_PreSaved_ResultsObj_Prodigal.rda
Fingerprint
e79f38b0
Format documented
Yes
Source
Proteomcis data: http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD000153 NCBI's Genome Browser: https://www.ncbi.nlm.nih.gov/genome/browse/#!/prokaryotes/ GenBank record: https://www.ncbi.nlm.nih.gov/nuccore/BX897699.1
Structure
Distinct
11
Element length
0 – 1,634
Total length
6,559
Elements
Element
Type
Distinct
Missing
Summary
StrainID
character
1
0
9 characters
Species
character
1
0
11 characters
GenomeLength
integer
1
0
1931047
GeneLeftPosnumeric1,63401 – 1929137mean 9.559e+5
Min.
1
1st Qu.
465138
Median
940932
Mean
955904
3rd Qu.
1.42649e+6
Max.
1929137
Std. dev
551573
Skewness
0.0688
Kurtosis
-1.175
Order
ascending
GeneRightPosnumeric1,6340825 – 1930402mean 9.568e+5
Min.
825
1st Qu.
466865
Median
941710
Mean
956785
3rd Qu.
1.42683e+6
Max.
1930402
Std. dev
551525
Skewness
0.0689
Kurtosis
-1.175
Order
ascending
GeneStrand
character
2
0
1 characters
GeneSource
character
1
0
8 characters
NumGenes
integer
1
0
1634
N_CS-_PE+_ORFsnumeric1500 – 1680654·3 × 6 matrixmean 3.921e+5
Min.
0
1st Qu.
1.25
Median
106
Mean
392100
3rd Qu.
545669
Max.
1680654
Std. dev
635633
Skewness
1.097
Kurtosis
-0.5601
Zeros
3
Outliers
20 low · 2 high
N_CS<_PE+_ORFs
numeric
0
0
0 values
CategoryAssignments
character
9
0
9 characters
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.22 | 2025-10-29 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.21 | 2025-04-15 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.20 | 2024-10-29 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.19 | 2024-04-30 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.18 | 2023-10-24 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.17 | 2023-04-25 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.16 | 2022-11-01 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.15 | 2022-04-26 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.14 | 2021-10-26 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.13 | 2021-05-19 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.12 | 2020-10-27 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.11 | 2020-04-27 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.10 | 2019-10-29 | 11 elements | Unchanged | rda · xz version 2 · 7.3 KB | exact |
| 3.9 | 2019-05-02 | 11 elements | – | rda · xz version 2 · 7.3 KB | exact |