HG001_PreSaved_ResultsObj_GenBank
`Assessment` Objects for *Staphylococcus aureus* subsp. *aureus* strain HG001
Bundled with AssessORFData · exported, loads via data()
Class
Assessment
Assessment/Results
Elements
11
Missing
0
Format
rda · xz
version 3 · 12 KB
File
data/HG001_PreSaved_ResultsObj_GenBank.rda
Fingerprint
a4c87fac
Format documented
Yes
Source
Proteomcis data: http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD000702 NCBI's Genome Browser: https://www.ncbi.nlm.nih.gov/genome/browse/#!/prokaryotes/ GenBank record: https://www.ncbi.nlm.nih.gov/nuccore/NZ_CP018205.1
Structure
Distinct
11
Element length
0 – 2,862
Total length
11,477
Elements
Element
Type
Distinct
Missing
Summary
StrainID
character
1
0
5 characters
Species
character
1
0
9 characters
GenomeLength
integer
1
0
2819767
GeneLeftPosinteger2,8620517 – 2819416mean 1.436e+6
Min.
517
1st Qu.
739304
Median
1469542
Mean
1.43608e+6
3rd Qu.
2.11525e+6
Max.
2819416
Std. dev
804333
Skewness
-0.0427
Kurtosis
-1.199
Order
ascending
GeneRightPosinteger2,86201878 – 2819553mean 1.437e+6
Min.
1878
1st Qu.
740454
Median
1.47048e+6
Mean
1.43692e+6
3rd Qu.
2.11665e+6
Max.
2819553
Std. dev
804298
Skewness
-0.0426
Kurtosis
-1.199
Order
ascending
GeneStrand
character
2
0
1 characters
GeneSource
character
1
0
7 characters
NumGenes
integer
1
0
2862
N_CS-_PE+_ORFs
numeric
0
0
0 values
N_CS<_PE+_ORFsnumeric1900 – 2558750·4 × 6 matrixmean 4.168e+5
Min.
0
1st Qu.
3
Median
48
Mean
416760
3rd Qu.
263982
Max.
2558750
Std. dev
810763
Skewness
1.697
Kurtosis
1.47
Zeros
3
Outliers
60 low · 6 high
CategoryAssignments
character
12
0
9 characters
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.22 | 2025-10-29 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.21 | 2025-04-15 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.20 | 2024-10-29 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.19 | 2024-04-30 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.18 | 2023-10-24 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.17 | 2023-04-25 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.16 | 2022-11-01 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.15 | 2022-04-26 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.14 | 2021-10-26 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.13 | 2021-05-19 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.12 | 2020-10-27 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.11 | 2020-04-27 | 11 elements | Unchanged | rda · xz version 3 · 12 KB | exact |
| 3.10 | 2019-10-29 | 11 elements | – | rda · xz version 3 · 12 KB | exact |