COH1_PreSaved_ResultsObj_GenBank
`Assessment` Objects for *Streptococcus agalactiae* strain COH1
Bundled with AssessORFData · exported, loads via data()
Class
Assessment
Assessment/Results
Elements
11
Missing
0
Format
rda · xz
version 2 · 8.3 KB
File
data/COH1_PreSaved_ResultsObj_GenBank.rda
Fingerprint
f993607e
Format documented
Yes
Source
Proteomcis data: http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD012567 NCBI's Genome Browser: https://www.ncbi.nlm.nih.gov/genome/browse/#!/prokaryotes/ GenBank record: https://www.ncbi.nlm.nih.gov/nuccore/HG939456.1
Structure
Distinct
11
Element length
0 – 2,003
Total length
8,023
Elements
Element
Type
Distinct
Missing
Summary
StrainID
character
1
0
4 characters
Species
character
1
0
13 characters
GenomeLength
integer
1
0
2065074
GeneLeftPosinteger2,0030186 – 2064278mean 1.051e+6
Min.
186
1st Qu.
535670
Median
1061193
Mean
1.05088e+6
3rd Qu.
1568258
Max.
2064278
Std. dev
596832
Skewness
-0.021
Kurtosis
-1.215
Order
ascending
GeneRightPosinteger2,00301547 – 2065051mean 1.052e+6
Min.
1547
1st Qu.
536738
Median
1061765
Mean
1.05178e+6
3rd Qu.
1.5688e+6
Max.
2065051
Std. dev
596826
Skewness
-0.0212
Kurtosis
-1.215
Order
ascending
GeneStrand
character
2
0
1 characters
GeneSource
character
1
0
7 characters
NumGenes
integer
1
0
2003
N_CS-_PE+_ORFs
numeric
0
0
0 values
N_CS<_PE+_ORFsnumeric600 – 932753·1 × 6 matrixmean 3.109e+5
Min.
0
1st Qu.
2.25
Median
106.5
Mean
310919
3rd Qu.
699460
Max.
932753
Std. dev
481590
Skewness
0.5379
Kurtosis
-1.958
Zeros
1
CategoryAssignments
character
11
0
9 characters
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.22 | 2025-10-29 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.21 | 2025-04-15 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.20 | 2024-10-29 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.19 | 2024-04-30 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.18 | 2023-10-24 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.17 | 2023-04-25 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.16 | 2022-11-01 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.15 | 2022-04-26 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.14 | 2021-10-26 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.13 | 2021-05-19 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.12 | 2020-10-27 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.11 | 2020-04-27 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.10 | 2019-10-29 | 11 elements | Unchanged | rda · xz version 2 · 8.3 KB | exact |
| 3.9 | 2019-05-02 | 11 elements | – | rda · xz version 2 · 8.3 KB | exact |