CCMP1375_PreSaved_ResultsObj_GenBank
`Assessment` Objects for *Prochlorococcus marinus* subsp. *marinus* strain CCMP1375
Bundled with AssessORFData · exported, loads via data()
Class
Assessment
Assessment/Results
Elements
11
Missing
0
Format
rda · xz
version 2 · 8.0 KB
File
data/CCMP1375_PreSaved_ResultsObj_GenBank.rda
Fingerprint
9158692e
Format documented
Yes
Source
Proteomcis data: http://proteomecentral.proteomexchange.org/cgi/GetDataset?ID=PXD005745 NCBI's Genome Browser: https://www.ncbi.nlm.nih.gov/genome/browse/#!/prokaryotes/ GenBank record: https://www.ncbi.nlm.nih.gov/nuccore/NC_005042.1
Structure
Distinct
11
Element length
0 – 1,882
Total length
7,563
Elements
Element
Type
Distinct
Missing
Summary
StrainID
character
1
0
8 characters
Species
character
1
0
10 characters
GenomeLength
integer
1
0
1751080
GeneLeftPosinteger1,8820174 – 1749792mean 8.727e+5
Min.
174
1st Qu.
452247
Median
858220
Mean
872705
3rd Qu.
1.31374e+6
Max.
1749792
Std. dev
495774
Skewness
0.0053
Kurtosis
-1.2
Order
ascending
GeneRightPosinteger1,88201331 – 1750904mean 8.735e+5
Min.
1331
1st Qu.
452508
Median
859580
Mean
873531
3rd Qu.
1314779
Max.
1750904
Std. dev
495773
Skewness
0.0056
Kurtosis
-1.2
Order
ascending
GeneStrand
character
2
0
1 characters
GeneSource
character
1
0
7 characters
NumGenes
integer
1
0
1882
N_CS-_PE+_ORFsnumeric2200 – 1355481·5 × 6 matrixmean 2.77e+5
Min.
0
1st Qu.
2.25
Median
89
Mean
276994
3rd Qu.
619367
Max.
1355481
Std. dev
431539
Skewness
1.18
Kurtosis
0.0998
Zeros
5
N_CS<_PE+_ORFs
numeric
0
0
0 values
CategoryAssignments
character
11
0
9 characters
Version history
| Version | Released | Size | Change | Stored as | Confidence |
|---|---|---|---|---|---|
| 3.23 | 2026-04-28 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.22 | 2025-10-29 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.21 | 2025-04-15 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.20 | 2024-10-29 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.19 | 2024-04-30 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.18 | 2023-10-24 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.17 | 2023-04-25 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.16 | 2022-11-01 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.15 | 2022-04-26 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.14 | 2021-10-26 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.13 | 2021-05-19 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.12 | 2020-10-27 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.11 | 2020-04-27 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.10 | 2019-10-29 | 11 elements | Unchanged | rda · xz version 2 · 8.0 KB | exact |
| 3.9 | 2019-05-02 | 11 elements | – | rda · xz version 2 · 8.0 KB | exact |