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selex

Selection-based differential sequence variant abundance dataset

Bundled with ALDEx2 · exported, loads via data()

Class
data.frame
Dimensions
1,600 × 14
Missing
0
Format
tab · gzip
31 KB
File
data/selex.txt.gz
Fingerprint
64491be2
Format documented
Yes
Source
McMurrough et al (2014) PNAS doi:10.1073/pnas.1322352111
About this object
A table with named columnsA bordered table: a header band ruled off from the body with an empty slot over each column where its name goes, and rows of cells under it that share every edge. Nothing is in any of them.

Equal-length columns presented as a table, R's standard rectangular format. R object catalogue

Columns
Column
Type
Distinct
Missing
Summary
X1_ANS
integer
511
0
8 – 1030mean 207.8
Min.
8
1st Qu.
89.75
Median
147
Mean
207.8
3rd Qu.
274
Max.
1030
Std. dev
174.767
Skewness
1.658
Kurtosis
2.767
Outliers
1070 low · 107 high
X1_BNS
integer
420
0
2 – 736mean 149.6
Min.
2
1st Qu.
61
Median
107.5
Mean
149.57
3rd Qu.
192
Max.
736
Std. dev
128.163
Skewness
1.742
Kurtosis
3.182
Outliers
1070 low · 107 high
X1_CNS
integer
503
0
7 – 1090mean 202
Min.
7
1st Qu.
85
Median
148
Mean
201.976
3rd Qu.
269.25
Max.
1090
Std. dev
167.397
Skewness
1.624
Kurtosis
2.912
Outliers
940 low · 94 high
X1_DNS
integer
441
0
6 – 926mean 154.8
Min.
6
1st Qu.
57
Median
114.5
Mean
154.786
3rd Qu.
205
Max.
926
Std. dev
137.578
Skewness
1.809
Kurtosis
4.048
Outliers
900 low · 90 high
X2_ANS
integer
535
0
8 – 1045mean 215.5
Min.
8
1st Qu.
91
Median
156
Mean
215.529
3rd Qu.
286
Max.
1045
Std. dev
180.488
Skewness
1.611
Kurtosis
2.497
Outliers
990 low · 99 high
X2_CNS
integer
495
0
5 – 927mean 197.4
Min.
5
1st Qu.
85
Median
141
Mean
197.417
3rd Qu.
260
Max.
927
Std. dev
164.509
Skewness
1.633
Kurtosis
2.552
Outliers
990 low · 99 high
X2_DNS
integer
820
0
6 – 2790mean 443.2
Min.
6
1st Qu.
143.75
Median
299.5
Mean
443.178
3rd Qu.
583.25
Max.
2790
Std. dev
427.292
Skewness
1.844
Kurtosis
3.975
Outliers
980 low · 98 high
X1_AS
integer
71
0
0 – 56735mean 120.1
Min.
0
1st Qu.
0
Median
0
Mean
120.099
3rd Qu.
0
Max.
56735
Std. dev
1997.14
Skewness
21.01
Kurtosis
497
Zeros
1,272
X1_BS
integer
73
0
0 – 77600mean 130.4
Min.
0
1st Qu.
0
Median
0
Mean
130.39
3rd Qu.
0
Max.
77600
Std. dev
2375.16
Skewness
25.75
Kurtosis
759.2
Zeros
1,287
X1_CS
integer
75
0
0 – 72115mean 123.2
Min.
0
1st Qu.
0
Median
0
Mean
123.214
3rd Qu.
0
Max.
72115
Std. dev
2425.05
Skewness
24.57
Kurtosis
647
Zeros
1,216
X1_DS
integer
83
0
0 – 68594mean 184.7
Min.
0
1st Qu.
0
Median
0
Mean
184.733
3rd Qu.
0
Max.
68594
Std. dev
2761.51
Skewness
19.76
Kurtosis
422.9
Zeros
1,273
X2_AS
integer
61
0
0 – 58439mean 79.61
Min.
0
1st Qu.
0
Median
0
Mean
79.6075
3rd Qu.
1
Max.
58439
Std. dev
1756.04
Skewness
28.02
Kurtosis
848.5
Zeros
1,094
Outliers
1600 low · 160 high
X2_CS
integer
59
0
0 – 60094mean 95.5
Min.
0
1st Qu.
0
Median
0
Mean
95.5044
3rd Qu.
1
Max.
60094
Std. dev
1866.93
Skewness
25.24
Kurtosis
722.5
Zeros
1,180
Outliers
1300 low · 130 high
X2_DS
integer
59
0
0 – 98629mean 147.1
Min.
0
1st Qu.
0
Median
0
Mean
147.083
3rd Qu.
1
Max.
98629
Std. dev
2945.03
Skewness
27.43
Kurtosis
836.7
Zeros
1,005
Outliers
1750 low · 175 high
The same data in 1 other package

The fingerprint is approximate for this file format, so treat the match as a strong hint rather than a certainty.

aIcCRAN

The structure fingerprint found nothing beyond this list.

Version history
VersionReleasedSizeChangeStored asConfidence
3.232026-04-281,600 × 14Unchangedtab · gzip
31 KB
degraded
3.222025-10-291,600 × 14Unchangedtab · gzip
31 KB
degraded
3.212025-05-011,600 × 14Unchangedtab · gzip
31 KB
degraded
3.202024-10-291,600 × 14Unchangedtab · gzip
31 KB
degraded
3.192024-04-301,600 × 14Unchangedtab · gzip
31 KB
degraded
3.182023-10-241,600 × 14Unchangedtab · gzip
31 KB
degraded
3.172023-04-251,600 × 14Unchangedtab · gzip
31 KB
degraded
3.162022-11-011,600 × 14Unchangedtab · gzip
31 KB
degraded
3.152022-05-031,600 × 14Unchangedtab · gzip
31 KB
degraded
3.142021-10-261,600 × 14Unchangedtab · gzip
31 KB
degraded
3.132021-05-191,600 × 14Unchangedtab · gzip
31 KB
degraded
3.122020-10-271,600 × 14Unchangedtab · gzip
31 KB
degraded
3.112020-04-271,600 × 14Unchangedtab · gzip
31 KB
degraded
3.102019-10-291,600 × 14Unchangedtab · gzip
31 KB
degraded
3.92019-05-021,600 × 14Unchangedtab · gzip
31 KB
degraded
3.82019-01-041,600 × 14Unchangedtab · gzip
31 KB
degraded
3.72018-04-301,600 × 14Unchangedtab · gzip
31 KB
degraded
3.62017-10-301,600 × 14Unchangedtab · gzip
31 KB
degraded
3.52017-04-241,600 × 14Unchangedtab · gzip
31 KB
degraded
3.42016-10-171,600 × 14Unchangedtab · gzip
31 KB
degraded
3.32016-05-031,600 × 14Unchangedtab · gzip
27 KB
degraded
3.22015-10-131,600 × 14Unchangedtab · gzip
27 KB
degraded
3.12015-04-161,600 × 14Unchangedtab · gzip
27 KB
degraded
3.02014-10-131,600 × 14–tab · gzip
27 KB
degraded

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