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spqnData

Bioc current

Data for the spqn package

v1.24.0 · Package record · experiment · Artistic-2.0

Release Lineage

Entered 3.11 · Apr 28, 2020

Current · Requires R 4.6

1.0 In 13 of 49 releases 3.23

Description

Bulk RNA-seq from GTEx on 4,000 randomly selected, expressed genes. Data has been processed for co-expression analysis.

Advisories

None published for Bioconductor

Code intelligence has not been computed for this package yet.

Code

Structure

Lines of code

43

Files

6

Compiled share

0%

Has compiled src

No

Language breakdown

Docs 43 (100%)

API

Exported functions

0

Internal functions

0

Testing

Has tests

No

Test-to-code ratio

–

testthat edition

–

Docs

Roxygen coverage

–

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

–

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.0

System requirements

–

C++ standard

–

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

13

First release

2020-04-27

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

–

Dep drift

0

LOC over versions

v3.11: 43 LOCv3.12: 43 LOCv3.13: 43 LOCv3.14: 43 LOCv3.15: 43 LOCv3.16: 43 LOCv3.17: 43 LOCv3.18: 43 LOCv3.19: 43 LOCv3.20: 43 LOCv3.21: 43 LOCv3.22: 43 LOCv3.23: 43 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

In the Bioconductor 3.23 release
READMEYes · 2 wordsVignettesNoNEWSNoCitation fileNoWebsitenot declared in DESCRIPTION
Help pages
1
Examples that run
100%1 run in a plain check
Exported functions with examples
not tracked
Documented parameters
not tracked
Return-value docs
not tracked
Help pages citing references
0%

Repository practices

Bioconductor git repository

Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.

No development-tooling practices detected in the Bioconductor git repository.

Datasets

Bundled datasets · 1
NameClassSizeAlso in
gtex.4k–––

All of spqnData's data objects

Topics

Maintainer
Yi Wang

Available on

CRANr2uBioconductorautoCRANCOPR

Suggested by (1)

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("spqnData")
Wang, Y., & Hansen, K. D. (2026). spqnData: Data for the spqn package (Version 1.24.0) [Computer software]. https://bioconductor.org/packages/spqnData

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for spqnData version 1.24.0 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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