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scanMiRData

Bioc current

miRNA Affinity models for the scanMiR package

v1.18.0 · experiment · GPL-3

Release Lineage

Entered 3.14 · Oct 27, 2021

Current · Requires R 4.6

1.0 In 10 of 49 releases 3.23

Description

This package contains companion data to the scanMiR package. It contains `KdModel` (miRNA 12-mer binding affinity models) collections corresponding to all human, mouse and rat mirbase miRNAs. See the scanMiR package for details.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

1 1 exported

Complexity

4 avg / 4 max

Call network

1 nodes / 0 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

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Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

214

Files

14

Compiled share

0%

Has compiled src

No

Language breakdown

R 78 (36.4%)Docs 75 (35%)Vignettes 61 (28.5%)

API

Exported functions

1

Internal functions

0

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

4.0

System requirements

C++ standard

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

10

First release

2021-10-26

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

0

LOC over versions

v3.14: 214 LOCv3.15: 214 LOCv3.16: 214 LOCv3.17: 214 LOCv3.18: 214 LOCv3.19: 214 LOCv3.20: 214 LOCv3.21: 214 LOCv3.22: 214 LOCv3.23: 214 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMEYes · 51 wordsVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
0%

Topics

Depended on by (1)

Bioconductor (1)

People

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