phosphonormalizer
Bioc currentCompensates for the bias introduced by median normalization in
Release Lineage
Entered 3.5 · Apr 25, 2017
Current · Requires R 4.6
Description
It uses the overlap between enriched and non-enriched datasets to compensate for the bias introduced in global phosphorylation after applying median normalization.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
1 1 exported
Complexity
25 avg / 25 max
Call network
1 nodes / 0 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
514
Files
13
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
1
Internal functions
0
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.08
testthat edition
–
CI present
No
CI type
[]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
0%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.0
System requirements
–
C++ standard
–
License
GPL (>= 2)
License flags
SPDX valid, OSI approved
History
Versions
19
First release
2017-04-24
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
1
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- References docs
- 33%
Topics
People
- Sohrab Saraei author maintainer
- Laura Elo ths
- Otto Kauko contributor
- Tomi Suomi contributor