openPrimeRui
Bioc removedShiny Application for Multiplex PCR Primer Design and Analysis
Release Lineage
Entered 3.6 · Oct 31, 2017
Removed after 3.19 · May 1, 2024
Description
A Shiny application providing methods for designing, evaluating, and comparing primer sets for multiplex polymerase chain reaction. Primers are designed by solving a set cover problem such that the number of covered template sequences is maximized with the smallest possible set of primers. To guarantee that high-quality primers are generated, only primers fulfilling constraints on their physicochemical properties are selected.
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People
- Matthias Döring author maintainer
- Nico Pfeifer author
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