multiMiR
Bioc currentIntegration of multiple microRNA-target databases with their disease and drug associations
Release Lineage
Entered 3.6 · Oct 31, 2017
Current · Requires R 4.6
Description
A collection of microRNAs/targets from external resources, including validated microRNA-target databases (miRecords, miRTarBase and TarBase), predicted microRNA-target databases (DIANA-microT, ElMMo, MicroCosm, miRanda, miRDB, PicTar, PITA and TargetScan) and microRNA-disease/drug databases (miR2Disease, Pharmaco-miR VerSe and PhenomiR).
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
77 20 exported
Complexity
2.6 avg / 36 max
Call network
77 nodes / 106 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
3,780
Files
61
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
20
Internal functions
57
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
0.02
testthat edition
–
CI present
Yes
CI type
["travis"]
PR gated
No
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
50%
Unsafe pattern score
0
Dep constraint coverage
22.2%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
3.4
System requirements
–
C++ standard
–
License
MIT + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
18
First release
2018-02-09
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 100%
- References docs
- 3%
Topics
Depended on by (1)
Bioconductor (1)
People
- Spencer Mahaffey maintainer author
- Katerina Kechris author cph ths
- Matt Mulvahill author
- Yuanbin Ru author
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("multiMiR")This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-08-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.