muleaData
Bioc currentGenes Sets for Functional Enrichment Analysis with the 'mulea' R Package
Release Lineage
Entered 3.19 · May 1, 2024
Current · Requires R 4.6
Description
ExperimentHubData package for the 'mulea' comprehensive overrepresentation and functional enrichment analyser R package. Here we provide ontologies (gene sets) in a data.frame for 27 different organisms, ranging from Escherichia coli to human, all acquired from publicly available data sources. Each ontology is provided with multiple gene and protein identifiers. Please see the NEWS file for a list of changes in each version.
None published for Bioconductor
Call graph
Open call graph →Code intelligence has not been computed for this package yet.
Code
Structure
Lines of code
353
Files
12
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
0
Internal functions
0
Testing
Has tests
No
Test-to-code ratio
0.00
testthat edition
–
Docs
Roxygen coverage
–
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
–
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
MIT + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
5
First release
2024-04-30
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- 1
- Examples that run
- 100%1 run in a plain check
- Exported functions with examples
- 100%
- Documented parameters
- not tracked
- Return-value docs
- not tracked
- Help pages citing references
- 0%
- muleaData HTML
Repository practices
1 development-tooling and community-health practice detected across 1 family in the upstream repository
Checks run against github.com/eltebioinformatics/muleadata on 2026-10-18.
Datasets
| Name | Class | Size | Also in |
|---|---|---|---|
| metadata | data.frame | 879 × 16 | No other package |
Topics
People
- Eszter Ari author maintainer
- Balázs Bohár author
- Lejla Gul author
- Tamás Stirling author
- Márton Ölbei author
Cite
Cite this package
Run in R for the authors' entry:
citation("muleaData")The package provides a citation file, so citation() returns the authors' own entry.
It points to 10.1101/2024.02.28.582444v1, 10.1101/2024.02.28.582444.
Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-21, which the citation names so these numbers can be found later. More on citing and the projects behind them.