miRDriver
Bioc removedmiRDriver: A Tool to Infer Copy Number Derived miRNA-Gene Networks in Cancer
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Description
The miRDriver package is designed for easy use and implementaion. It identifies frequently aberrated regions using GISTIC and computes differentially expressed genes between the two patient groups as frequently aberrated group and non-aberrated group. Utilizing copy number aberration, DNA methylation, gene expression, transcription factor expression and miRNA expression datasets, miRDriver applies a LASSO-based method to select miRNA-target gene interactions.
None published for Bioconductor
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People
- Matthew Moravec maintainer
- Banabithi Bose author
- Serdar Bozdag author
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