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marinerData

Bioc current

ExperimentHub data for the mariner package

v1.12.0 · experiment · GPL-3

Release Lineage

Entered 3.17 · Apr 26, 2023

Current · Requires R 4.6

1.0 In 7 of 49 releases 3.23

Description

Subsampled Hi-C in HEK cells expressing the NHA9 fusion with an F to S mutated IDR ("FS") or without any mutations to the IDR ("Wildtype" or "WT"). These files are used for testing mariner functions and some examples.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

1 0 exported

Complexity

1 avg / 1 max

Call network

1 nodes / 0 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

580

Files

26

Compiled share

0%

Has compiled src

No

Language breakdown

R 217 (37.4%)Tests 34 (5.9%)Docs 258 (44.5%)Vignettes 71 (12.2%)

API

Exported functions

0

Internal functions

1

Testing & CI

Has tests

Yes

Test-to-code ratio

0.16

testthat edition

3

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

0%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

7

First release

2023-04-25

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

0

LOC over versions

v3.17: 580 LOCv3.18: 580 LOCv3.19: 580 LOCv3.20: 580 LOCv3.21: 580 LOCv3.22: 580 LOCv3.23: 580 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

Depended on by (1)

Bioconductor (1)

People

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