lydata
Bioc currentExample Dataset for crossmeta Package
Release Lineage
Entered 3.4 · Oct 18, 2016
Current · Requires R 4.6
Description
Raw data downloaded from GEO for the compound LY294002. Raw data is from multiple platforms from Affymetrix and Illumina. This data is used to illustrate the cross-platform meta-analysis of microarray data using the crossmeta package.
None published for Bioconductor
Call graph
Open call graph →Code intelligence has not been computed for this package yet.
Code
Structure
Lines of code
–
Files
49
Compiled share
0%
Has compiled src
No
API
Exported functions
0
Internal functions
0
Testing
Has tests
No
Test-to-code ratio
–
testthat edition
–
Docs
Roxygen coverage
–
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
–
Unsafe pattern score
0
Dep constraint coverage
–
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
–
System requirements
–
C++ standard
–
License
MIT + file LICENSE
License flags
SPDX valid, OSI approved
History
Versions
20
First release
2016-10-17
Latest release
2026-04-28
Avg cadence
182 days
Cold removal rate
–
Dep drift
0
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Help pages
- No help pages
- Examples that run
- no examples
- Exported functions with examples
- not tracked
- Documented parameters
- not tracked
- Return-value docs
- not tracked
- Help pages citing references
- not tracked
Repository practices
Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.
No development-tooling practices detected in the Bioconductor git repository.
Datasets
| Name | Class | Size | Also in |
|---|---|---|---|
| GSE15069_diff_expr_symbol | list | 5 elements | No other package |
| GSE15069_diff_path | list | 3 elements | No other package |
| GSE29689_diff_expr_symbol | list | 5 elements | No other package |
| GSE29689_diff_path | list | 3 elements | No other package |
| GSE29689_eset | – | – | – |
| GSE34817_diff_expr_symbol | list | 5 elements | No other package |
| GSE34817_diff_path | list | 3 elements | No other package |
| GSE50841_diff_expr_symbol | list | 5 elements | No other package |
| GSE50841_diff_path | list | 3 elements | No other package |
| GSE9601_diff_expr_symbol | list | 5 elements | No other package |
| GSE9601_diff_path | list | 3 elements | No other package |
| GSE9601_eset | list | 1 element | No other package |
Topics
Suggested by (2)
People (from the free-text Author field)
Cite
Cite this package
Run in R for the authors' preferred citation:
citation("lydata")Cite the R Observatory
For a number measured here: a download total, a coverage figure, an archival date.
From data release v2026-10-24, which the citation names so these numbers can be found later. More on citing and the projects behind them.