iCOBRA
Bioc currentComparison and Visualization of Ranking and Assignment Methods
Release Lineage
Entered 3.3 · May 4, 2016
Current · Requires R 4.6
Description
This package provides functions for calculation and visualization of performance metrics for evaluation of ranking and binary classification (assignment) methods. Various types of performance plots can be generated programmatically. The package also contains a shiny application for interactive exploration of results.
Test coverage
Line coverage
–
Expression
–
Tests / Examples
–
Functions
46 24 exported
Complexity
12.2 avg / 162 max
Call network
46 nodes / 53 edges
Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.
Call graph
Open call graph →Lowest coverage
Per-function coverage is not measured for this package yet.
Code
Structure
Lines of code
27,394
Files
98
Compiled share
0%
Has compiled src
No
Language breakdown
API
Exported functions
78
Internal functions
22
Recent export changes
Testing & CI
Has tests
Yes
Test-to-code ratio
1.36
testthat edition
–
CI present
Yes
CI type
["github-actions"]
PR gated
Yes
Docs
Roxygen coverage
100%
Health & Security signals
Informational signals; not verdicts.
on.exit coverage
0%
Unsafe pattern score
0
Dep constraint coverage
14.3%
Secret pattern count
0
Bundled 3rd-party code
2 items
Portability & License
Min R version
4.4.0
System requirements
–
C++ standard
–
License
GPL (>=2)
License flags
not SPDX, not OSI
History
Versions
21
First release
2016-05-15
Latest release
2026-04-28
Avg cadence
183 days
Cold removal rate
–
Dep drift
6
LOC over versions
Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.
Documentation
- Examples that run
- 100%
- Documented parameters
- 100%
- Return-value docs
- 98%
- References docs
- 2%
Topics
Depended on by (2)
Bioconductor (2)
People
- Charlotte Soneson author maintainer