excluderanges
Bioc currentGenomic coordinates of problematic genomic regions
Release Lineage
Entered 3.15 · Apr 27, 2022
Current · Requires R 4.6
Description
Genomic coordinates of problematic genomic regions that should be avoided when working with genomic data. GRanges of exclusion regions (formerly known as blacklisted), centromeres, telomeres, known heterochromatin regions, etc. (UCSC 'gap' table data). Primarily for human and mouse genomes, hg19/hg38 and mm9/mm10 genome assemblies.
None published for Bioconductor
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Repository practices
6 development-tooling and community-health practices detected across 3 families in the upstream repository
Checks run against github.com/dozmorovlab/excluderanges on 2026-10-11.
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Topics
People
- Mikhail Dozmorov author maintainer
- Eric Davis author
- Stuart Lee author
- Michael Love author
- Wancen Mu author
- Douglas Phanstiel author
- Tim Triche author
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Run in R for the authors' preferred citation:
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