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diffloopdata

Bioc current

Example ChIA-PET Datasets for the diffloop Package

v1.40.0 · Package record · experiment · MIT + file LICENSE

Release Lineage

Entered 3.3 · May 4, 2016

Current · Requires R 4.6

1.0 In 21 of 49 releases 3.23

Description

ChIA-PET example datasets and additional data for use with the diffloop package.

Advisories

None published for Bioconductor

Code intelligence has not been computed for this package yet.

Code

Structure

Lines of code

23

Files

12

Compiled share

0%

Has compiled src

No

Language breakdown

Vignettes 23 (100%)

API

Exported functions

0

Internal functions

0

Testing

Has tests

No

Test-to-code ratio

–

testthat edition

–

Docs

Roxygen coverage

–

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

–

Unsafe pattern score

0

Dep constraint coverage

–

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

–

System requirements

–

C++ standard

–

License

MIT + file LICENSE

License flags

SPDX valid, OSI approved

History

Versions

21

First release

2016-05-15

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

–

Dep drift

0

LOC over versions

v3.3: 23 LOCv3.4: 23 LOCv3.5: 23 LOCv3.6: 23 LOCv3.7: 23 LOCv3.8: 23 LOCv3.9: 23 LOCv3.10: 23 LOCv3.11: 23 LOCv3.12: 23 LOCv3.13: 23 LOCv3.14: 23 LOCv3.15: 23 LOCv3.16: 23 LOCv3.17: 23 LOCv3.18: 23 LOCv3.19: 23 LOCv3.20: 23 LOCv3.21: 23 LOCv3.22: 23 LOCv3.23: 23 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

In the Bioconductor 3.23 release
READMENoVignettesYes · 1 · staticNEWSYesCitation fileNoWebsitenot declared in DESCRIPTION
Help pages
No help pages
Examples that run
no examples
Exported functions with examples
not tracked
Documented parameters
not tracked
Return-value docs
not tracked
Help pages citing references
not tracked
Vignettes (1)

Repository practices

Bioconductor git repository

Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.

No development-tooling practices detected in the Bioconductor git repository.

Topics

Maintainer
Caleb Lareau

Available on

CRANr2uBioconductorautoCRANCOPR

Suggested by (1)

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("diffloopdata")
Aryee, M., & Lareau, C. (2026). diffloopdata: Example ChIA-PET Datasets for the diffloop Package (Version 1.40.0) [Computer software]. https://bioconductor.org/packages/diffloopdata

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for diffloopdata version 1.40.0 [Data set]. HJJB, LLC. Data release v2026-10-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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