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celarefData

Bioc current

Processed scRNA data for celaref Vignette - cell labelling by reference

v1.30.0 · Package record · experiment · GPL-3

Release Lineage

Entered 3.8 · Oct 31, 2018

Current · Requires R 4.6

1.0 In 16 of 49 releases 3.23

Description

This experiment data contains some processed data used in the celaref package vignette. These are publically available datasets, that have been processed by celaref package, and can be manipulated further with it.

Advisories

None published for Bioconductor

Code intelligence has not been computed for this package yet.

Code

Structure

Lines of code

354

Files

8

Compiled share

0%

Has compiled src

No

Language breakdown

Vignettes 354 (100%)

API

Exported functions

0

Internal functions

0

Testing

Has tests

No

Test-to-code ratio

–

testthat edition

–

Docs

Roxygen coverage

–

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

–

Unsafe pattern score

0

Dep constraint coverage

–

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

3.5.0

System requirements

–

C++ standard

–

License

GPL-3

License flags

SPDX valid, OSI approved

History

Versions

16

First release

2018-10-30

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

–

Dep drift

0

LOC over versions

v3.8: 282 LOCv3.9: 282 LOCv3.10: 354 LOCv3.11: 354 LOCv3.12: 354 LOCv3.13: 354 LOCv3.14: 354 LOCv3.15: 354 LOCv3.16: 354 LOCv3.17: 354 LOCv3.18: 354 LOCv3.19: 354 LOCv3.20: 354 LOCv3.21: 354 LOCv3.22: 354 LOCv3.23: 354 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

In the Bioconductor 3.23 release
READMENoVignettesYes · 1 · dynamicNEWSYes · 67% structuredCitation fileNoWebsitenot declared in DESCRIPTION
Help pages
No help pages
Examples that run
no examples
Exported functions with examples
not tracked
Documented parameters
not tracked
Return-value docs
not tracked
Help pages citing references
not tracked
Vignettes (1)

Repository practices

Bioconductor git repository

Checks read the Bioconductor git repository (git.bioconductor.org), branch RELEASE_3_23.

No development-tooling practices detected in the Bioconductor git repository.

Datasets

Bundled datasets · 1
NameClassSizeAlso in
metadatadata.frame7 × 17No other package

All of celarefData's data objects

Topics

Maintainer
Sarah Williams

Available on

CRANr2uBioconductorautoCRANCOPR

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("celarefData")
Williams, S. (2026). celarefData: Processed scRNA data for celaref Vignette - cell labelling by reference (Version 1.30.0) [Computer software]. https://bioconductor.org/packages/celarefData

This package has no citation file, so citation() returns this entry built from DESCRIPTION.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for celarefData version 1.30.0 [Data set]. HJJB, LLC. Data release v2026-10-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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