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bladderbatch

Bioc current

Bladder gene expression data illustrating batch effects

v1.50.0 · experiment · Artistic-2.0

Release Lineage

Entered 2.13 · Oct 15, 2013

Current · Requires R 4.6

1.0 In 26 of 49 releases 3.23

Description

This package contains microarray gene expression data on 57 bladder samples from 5 batches. The data are used as an illustrative example for the sva package.

Code intelligence has not been computed for this package yet.

Code

Structure

Lines of code

116

Files

8

Compiled share

0%

Has compiled src

No

Language breakdown

Docs 17 (14.7%)Vignettes 99 (85.3%)

API

Exported functions

0

Internal functions

0

Testing & CI

Has tests

No

Test-to-code ratio

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

System requirements

C++ standard

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

26

First release

2013-12-13

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

0

LOC over versions

v2.13: 116 LOCv2.14: 116 LOCv3.0: 116 LOCv3.1: 116 LOCv3.2: 116 LOCv3.3: 116 LOCv3.4: 116 LOCv3.5: 116 LOCv3.6: 116 LOCv3.7: 116 LOCv3.8: 116 LOCv3.9: 116 LOCv3.10: 116 LOCv3.11: 116 LOCv3.12: 116 LOCv3.13: 116 LOCv3.14: 116 LOCv3.15: 116 LOCv3.16: 116 LOCv3.17: 116 LOCv3.18: 116 LOCv3.19: 116 LOCv3.20: 116 LOCv3.21: 116 LOCv3.22: 116 LOCv3.23: 116 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Topics

Depended on by (4)

Bioconductor (4)

People

Jeffrey T. Leek

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("bladderbatch")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for bladderbatch version 1.50.0 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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