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bioDist

Bioc current

Different distance measures

v1.84.0 · software · Artistic-2.0

Release Lineage

Entered 1.6 · May 18, 2005

Current · Requires R 4.6

1.0 In 43 of 49 releases 3.23

Description

A collection of software tools for calculating distance measures.

Test coverage

Line coverage

Expression

Tests / Examples

Functions

5 1 exported

Complexity

1.8 avg / 4 max

Call network

5 nodes / 0 edges

Test coverage is not measured for Bioconductor packages; nodes fall back to a neutral fill.

Loading call graph…

Lowest coverage

Per-function coverage is not measured for this package yet.

Code

Structure

Lines of code

1,033

Files

25

Compiled share

0%

Has compiled src

No

Language breakdown

R 476 (46.1%)Docs 421 (40.8%)Vignettes 136 (13.2%)

API

Exported functions

10

Internal functions

3

Testing & CI

Has tests

No

Test-to-code ratio

0.00

testthat edition

CI present

No

CI type

[]

PR gated

No

Docs

Roxygen coverage

100%

Health & Security signals

Informational signals; not verdicts.

on.exit coverage

100%

Unsafe pattern score

0

Dep constraint coverage

0%

Secret pattern count

0

Bundled 3rd-party code

2 items

Portability & License

Min R version

2.0

System requirements

C++ standard

License

Artistic-2.0

License flags

SPDX valid, OSI approved

History

Versions

43

First release

2005-05-19

Latest release

2026-04-28

Avg cadence

182 days

Cold removal rate

Dep drift

3

LOC over versions

v1.6: 603 LOCv1.7: 603 LOCv1.8: 704 LOCv1.9: 750 LOCv2.0: 773 LOCv2.1: 774 LOCv2.2: 726 LOCv2.3: 726 LOCv2.4: 875 LOCv2.5: 898 LOCv2.6: 898 LOCv2.7: 898 LOCv2.8: 900 LOCv2.9: 900 LOCv2.10: 900 LOCv2.11: 900 LOCv2.12: 897 LOCv2.13: 897 LOCv2.14: 1,033 LOCv3.0: 1,033 LOCv3.1: 1,033 LOCv3.2: 1,033 LOCv3.3: 1,033 LOCv3.4: 1,033 LOCv3.5: 1,033 LOCv3.6: 1,033 LOCv3.7: 1,033 LOCv3.8: 1,033 LOCv3.9: 1,033 LOCv3.10: 1,033 LOCv3.11: 1,033 LOCv3.12: 1,033 LOCv3.13: 1,033 LOCv3.14: 1,033 LOCv3.15: 1,033 LOCv3.16: 1,033 LOCv3.17: 1,033 LOCv3.18: 1,033 LOCv3.19: 1,033 LOCv3.20: 1,033 LOCv3.21: 1,033 LOCv3.22: 1,033 LOCv3.23: 1,033 LOC

Per-file churn detail lives in the source pipeline: https://github.com/r-observatory/bioc-code-metrics.

Documentation

Documentation
READMENoVignettesYes · dynamicpkgdown siteNoNEWSNoCode of conductNoContributing guideNo
Examples that run
100%
Documented parameters
100%
Return-value docs
100%
References docs
11%

Topics

Depended on by (4)

People

Bioconductor Package Maintainer

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("bioDist")

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for bioDist version 1.84.0 [Data set]. HJJB, LLC. Data release v2026-08-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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