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DChIPRep

Bioc removed

DChIPRep - Analysis of chromatin modification ChIP-Seq data with replication

v1.18.0 · MIT + file LICENCE

Release Lineage

Entered 3.2 · Oct 14, 2015

Removed after 3.11 · Apr 28, 2020

1.0 In 10 of 49 releases 3.23

Description

The DChIPRep package implements a methodology to assess differences between chromatin modification profiles in replicated ChIP-Seq studies as described in Chabbert et. al - http://www.dx.doi.org/10.15252/msb.20145776. A detailed description of the method is given in the software paper at https://doi.org/10.7717/peerj.1981

Advisories

None published for Bioconductor

Code intelligence has not been computed for this package yet.

Code

Code metrics have not been computed for this package yet.

Topics

Available on

CRANr2uBioconductorautoCRANCOPR

People

Cite

Cite this package

Run in R for the authors' preferred citation:

citation("DChIPRep")
Klaus, B., Chabbert, C., & Gibb, S. (2020). DChIPRep: DChIPRep - Analysis of chromatin modification ChIP-Seq data with replication (Version 1.18.0) [Computer software]. https://bioconductor.org/packages/DChIPRep

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for DChIPRep version 1.18.0 [Data set]. HJJB, LLC. Data release v2026-10-22. https://doi.org/10.5281/zenodo.21843040

From data release v2026-10-22, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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