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CopyhelpeR

Bioc current

Helper files for CopywriteR

v1.44.0 · experiment · GPL-2
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Release Lineage

Entered 3.1 · Apr 17, 2015

Current · Requires R 4.6

1.0 In 23 of 49 releases 3.23

Description

This package contains the helper files that are required to run the Bioconductor package CopywriteR. It contains pre-assembled 1kb bin GC-content and mappability files for the reference genomes hg18, hg19, hg38, mm9 and mm10. In addition, it contains a blacklist filter to remove regions that display CNV. Files are stored as GRanges objects from the GenomicRanges Bioconductor package.

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Topics

AnnotationData › Organism › Homo_sapiens
AnnotationData › SequenceAnnotation › GenomicSequence

Depended on by (1)

Bioconductor (1)

CopywriteR

People

Oscar Krijgsman