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AHLRBaseDbs

Bioc current

LRBaseDbs for AnnotationHub

v1.8.0 · annotation · Artistic-2.0

Release Lineage

Entered 3.15 · Apr 27, 2022

Current · Requires R 4.6

1.0 In 9 of 49 releases 3.23

Description

Supplies AnnotationHub with `LRbaseDb` Ligand-Receptor annotation databases for many species. All the SQLite files are generated by our Snakemake workflow [lrbase-workflow](https://github.com/rikenbit/lrbase-workflow). For the details, see the README.md of lrbase-workflow.

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Cite

Cite this package

Run in R for the authors' preferred citation:

citation("AHLRBaseDbs")
Tsuyuzaki, K., Ishii, M., & Nikaido, I. (2026). AHLRBaseDbs: LRBaseDbs for AnnotationHub (Version 1.8.0) [Computer software]. https://bioconductor.org/packages/AHLRBaseDbs

This is what citation() produces when a package has no citation file of its own. If it prints something else, use that.

Cite the R Observatory

For a number measured here: a download total, a coverage figure, an archival date.

APA

Balamuta, J. J. (2026). R Observatory: Metrics for AHLRBaseDbs version 1.8.0 [Data set]. HJJB, LLC. Data release v2026-08-25. https://doi.org/10.5281/zenodo.21843040

From data release v2026-08-25, which the citation names so these numbers can be found later. More on citing and the projects behind them.

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