Packages
117 packages on Bioconductor tagged Normalization or BSgenome, most distinct IPs first
Normalization and BSgenome in Topics
| Package | Maintainer | Category | Latest version | Distinct IPs a month | Needs |
|---|---|---|---|---|---|
| limma Linear Models for Microarray and Omics DataGordon Smyth | Gordon Smyth | software | 10 Aug 2026 | 45,965 | 6 |
| edgeR Empirical Analysis of Digital Gene Expression Data in RYunshun Chen | Yunshun Chen | software | 19 Oct 2026 | 32,392 | 10 |
| BSgenome.Hsapiens.UCSC.hg38 Full genomic sequences for Homo sapiens (UCSC genome hg38)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 4,989 | 60 |
| BSgenome.Hsapiens.UCSC.hg19 Full genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 2,842 | 58 |
| BSgenome.Mmusculus.UCSC.mm10 Full genome sequences for Mus musculus (UCSC version mm10, based on GRCm38.p6)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 2,152 | 58 |
| ACME Algorithms for Calculating Microarray Enrichment (ACME)Sean Davis | Sean Davis | software | 28 Apr 2026 | 1,278 | 7 |
| affylmGUI GUI for limma Package with Affymetrix MicroarraysGordon Smyth | Gordon Smyth | software | 28 Apr 2026 | 1,194 | 55 |
| limmaGUI GUI for limma Package With Two Color MicroarraysGordon Smyth | Gordon Smyth | software | 28 Apr 2026 | 1,165 | 11 |
| BSgenome.Hsapiens.NCBI.GRCh38 Full genome sequences for Homo sapiens (GRCh38)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 1,017 | 58 |
| BSgenome.Celegans.UCSC.ce2 Full genome sequences for Caenorhabditis elegans (UCSC version ce2)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 1,010 | 58 |
| BSgenome.Hsapiens.UCSC.hg18 Full genome sequences for Homo sapiens (UCSC version hg18)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 888 | 58 |
| BSgenome.Dmelanogaster.UCSC.dm3 Full genome sequences for Drosophila melanogaster (UCSC version dm3)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 870 | 58 |
| MANOR CGH Micro-Array NORmalizationPierre Neuvial | Pierre Neuvial | software | 28 Apr 2026 | 855 | 9 |
| BSgenome.Scerevisiae.UCSC.sacCer2 Saccharomyces cerevisiae (Yeast) full genome (UCSC version sacCer2)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 850 | 58 |
| BSgenome.Mmusculus.UCSC.mm39 Full genome sequences for Mus musculus (UCSC genome mm39, based on GRCm39)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 669 | 58 |
| BSgenome.Celegans.UCSC.ce11 Full genome sequences for Caenorhabditis elegans (UCSC version ce11)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 531 | 58 |
| BSgenome.Scerevisiae.UCSC.sacCer1 Saccharomyces cerevisiae (Yeast) full genome (UCSC version sacCer1)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 512 | 58 |
| BSgenome.Scerevisiae.UCSC.sacCer3 Saccharomyces cerevisiae (Yeast) full genome (UCSC version sacCer3)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 486 | 58 |
| BSgenome.Hsapiens.1000genomes.hs37d5 1000genomes Reference Genome Sequence (hs37d5)Julian Gehring | Julian Gehring | annotation | no date on record | 486 | 58 |
| BSgenome.Hsapiens.UCSC.hg38.masked Full masked genomic sequences for Homo sapiens (UCSC version hg38)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 476 | 61 |
| BSgenome.Rnorvegicus.UCSC.rn6 Full genome sequences for Rattus norvegicus (UCSC version rn6)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 462 | 58 |
| BSgenome.Hsapiens.UCSC.hg19.masked Full masked genome sequences for Homo sapiens (UCSC version hg19, based on GRCh37.p13)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 461 | 59 |
| BSgenome.Rnorvegicus.UCSC.rn5 Full genome sequences for Rattus norvegicus (UCSC version rn5)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 453 | 58 |
| BSgenome.Mmusculus.UCSC.mm9 Full genome sequences for Mus musculus (UCSC version mm9)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 398 | 58 |
| BSgenome.Ecoli.NCBI.20080805 Escherichia coli full genomesBioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 344 | 58 |
| BSgenome.Drerio.UCSC.danRer7 Full genome sequences for Danio rerio (UCSC version danRer7)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 326 | 58 |
| BSgenome.Celegans.UCSC.ce10 Full genome sequences for Caenorhabditis elegans (UCSC version ce10)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 274 | 58 |
| BSgenome.Dmelanogaster.UCSC.dm6 Full genome sequences for Drosophila melanogaster (UCSC version dm6)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 273 | 58 |
| BSgenome.Athaliana.TAIR.TAIR9 Full genome sequences for Arabidopsis thaliana (TAIR9)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 250 | 58 |
| BSgenome.Ggallus.UCSC.galGal3 Full genome sequences for Gallus gallus (UCSC version galGal3)Bioconductor Package Maintainer | Bioconductor Package Maintainer | annotation | no date on record | 250 | 58 |