Packages

229 packages on Bioconductor tagged AnnotationData or BSgenome or Genetics, most distinct IPs first

AnnotationData, BSgenome and Genetics in Topics

Package	Maintainer	Category	Latest version	Distinct IPs a month	Needs
ensembldb Utilities to create and use Ensembl-based annotation databasesJohannes Rainer	Johannes Rainer	software	25 May 2026	11,000	80
hgu133plus2cdf hgu133plus2cdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,618	42
cn.mops cn.mops - Mixture of Poissons for CNV detection in NGS dataGundula Povysil	Gundula Povysil	software	28 Apr 2026	1,256	30
hgu95av2cdf hgu95av2cdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,217	42
hgu95av2probe Probe sequence data for microarrays of type hgu95av2Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	1,164	42
nucleR Nucleosome positioning package for RAlba Sala	Alba Sala	software	28 Apr 2026	1,145	76
BEAT BEAT - BS-Seq Epimutation Analysis ToolkitKemal Akman	Kemal Akman	software	28 Apr 2026	1,069	70
BiSeq Processing and analyzing bisulfite sequencing dataKatja Hebestreit	Katja Hebestreit	software	28 Apr 2026	1,051	89
hgu133acdf hgu133acdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	971	42
mouse4302cdf mouse4302cdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	944	42
hgu133aprobe Probe sequence data for microarrays of type hgu133aBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	939	42
drosophila2probe Probe sequence data for microarrays of type drosophila2Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	921	42
trio Testing of SNPs and SNP Interactions in Case-Parent Trio StudiesHolger Schwender	Holger Schwender	software	28 Apr 2026	888	20
hapFabia hapFabia: Identification of very short segments of identity by descent (IBD) characterized by rare variants in large sequencing dataAndreas Mitterecker	Andreas Mitterecker	software	28 Apr 2026	886	9
logicFS Identification of SNP InteractionsHolger Schwender	Holger Schwender	software	28 Apr 2026	878	12
panelcn.mops CNV detection tool for targeted NGS panel dataGundula Povysil	Gundula Povysil	software	28 Apr 2026	838	31
GenomicOZone Delineate outstanding genomic zones of differential gene activityHua Zhong	Hua Zhong	software	28 Apr 2026	734	155
GeneticsPed Pedigree and genetic relationship functionsDavid Henderson	David Henderson	software	28 Apr 2026	684	11
hgu133a2cdf hgu133a2cdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	675	42
rae230aprobe Probe sequence data for microarrays of type rae230aBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	624	42
hgu133plus2probe Probe sequence data for microarrays of type hgu133plus2Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	537	42
soybeancdf soybeancdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	487	42
hgu95acdf hgu95acdfBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	479	42
mouse4302probe Probe sequence data for microarrays of type mouse4302Bioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	472	42
shiny.gosling A Grammar-based Toolkit for Scalable and Interactive Genomics Data Visualization for R and ShinyAppsilon	Appsilon	software	28 Apr 2026	450	42
soybeanprobe Probe sequence data for microarrays of type soybeanBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	420	42
wheatprobe Probe sequence data for microarrays of type wheatBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	416	42
riceprobe Probe sequence data for microarrays of type riceBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	410	42
poplarprobe Probe sequence data for microarrays of type poplarBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	405	42
rhesusprobe Probe sequence data for microarrays of type rhesusBioconductor Package Maintainer	Bioconductor Package Maintainer	annotation	no date on record	405	42